Trachemys scripta elegans (red-eared slider): 117871275
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Entry
117871275 CDS
T07347
Symbol
RSF1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117871275 (RSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117871275 (RSF1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
117871275 (RSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
Motif
Other DBs
NCBI-GeneID:
117871275
NCBI-ProteinID:
XP_034614989
LinkDB
All DBs
Position
1:330403630..330526277
Genome browser
AA seq
1440 aa
AA seq
DB search
MAAVAAPTAPSPPPPPPCCPGSWPNFAVVCSFLERYGALLDLPELPFPELERVLQPPQEP
GDQVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEKKGYLETSVECK
LGILKYLCECQFDDNLKFKNIINEEDADAMRLQPIGRDKDGLMYWYQLDQEHNVRMYVEE
QDDQDGSSWKCIVRNRNELAETLELLKAQIDPALLKKNNQQDSSSRESPSIEDEDSKKEE
EISPPGNELKIKEEEKNMEEQSKELESLPPPTVPADENMMKMEKVEEKEIIKLPVIVKLE
KPSENSEEKQITKEENDSFKENVKPVKAEVKENKVEPKDLKDIKSSTDKITVHEPERLEF
CVNVKTPQEVVDKSAEESEKLKNDQQAKIPLKKREIKLTDDYDSPIKGSLCKCVTPTKDV
LKEEGKPEEEGFRRVPTITALCPDGKLLVNGEVTSEKVAQNVTQNNKSEHSISTKEDSSS
SSKEKNCISGGKISDSLNSVSKIVKTYEDEKNVPTDKEVAATISEVSNQKVPLKEESSLM
EKESLDSMTSEVAMEDSWKAGYCPKKPEEKLALKTRKDRRPPLKECLEKLEKSMKTSTPK
EPPKLDLTDEEGLKSKNELEKKSDSPKAAETPPSSIPPVPSEKSALEKEGSDSKNILPDE
SKVQEGSDLEKQKEEFEVPRTEPDKQDNAQTSNIEESPETKKESPVQKSKFKYKLVSEEN
ICVTDNKEITSERQKEGIKLTIRISSRKKKPDPPPKTQDTEQKEEEEVNVGRTLRRSPRI
SKPTPKVVETRDQKTDKKRGEEEEEKLAALQKQDRREDVKKQEKESNSKVSKVTQRSKVR
WTGTRTRGRWRYSSNEDSEESETEENSEEESEGGEEEEEPAPADDDEPCKKCGLPNHPEL
ILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDVVLKKKERAE
RRKERLVYVGISIENIIPPQEPEIPESQEEKKKDSKKSKSKRLERRSTRTRKCISYRFDE
FDEAIDEAIEDDIKEADGGGGGRGKDMSNITGHRGKDISTILEEERKENKRPQRAAAARR
KKRRRLNDLDSDSNLDEEESEDEFRISDGSQDEFVVSEENPDESEDDQLSNEDSDTEFCA
RRPRRHHSRPMRQSRRLRRKTVKKKYSEDDEEEDSEDNLSRESESGDYTDYSDDDYLETR
RRRSRRNQKRQVNYKEDSESDGSQKSVRYGKELRRLHKRRLPSSDSEESYMSKNSEDDEP
AKESKQSIRKRSRSTDEYSEEEEEDGDEPEEGRPVRKRLNRIETDDEDNCDNANKDAEKP
APANKPSAPHAPHDSTKKPCYRIESDDEDDFDNVGKVESPLDYSLVDLPSTNGQSPGKTI
ETLIGKPSEKTQAPKDSTANANLAPNGTGGGQEVVGPEEEEDELLRVTDLVDYVCNSEQL
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcggctcctacggctccatctccgcctcccccgcccccgtgctgcccc
ggctcgtggccgaacttcgccgtggtctgctccttcctggagcgctacggggcgctgctg
gacctgcccgagctgcccttccccgagctggagcgcgtcctgcagccgccgcaggagccc
ggggaccaggttccaaaagagttggtagaacttcacttgaaactgatgaggaagattggg
aagtctgtcacagcagacagatgggaaaaatacttgatcaagatatgccaagagttcaac
agtacttgggcatgggagatggagaagaaaggatacctggaaacgagtgttgaatgcaaa
ttgggaattctgaagtacctctgtgagtgtcagtttgatgacaatctaaaatttaagaat
atcattaatgaagaggatgctgatgctatgcgtctccagccaattggtcgagacaaggat
ggtctaatgtattggtaccagctggatcaagaacataatgtgagaatgtacgtagaagaa
caggatgaccaggatggatcttcttggaaatgcatagtcagaaaccgaaatgagctagct
gagacgcttgagcttttgaaagcacaaatcgatcctgcactgttgaaaaagaacaaccag
caggacagctcatcacgtgaaagccctagcatagaagatgaagatagcaaaaaggaggaa
gaaatatctccaccaggaaatgaattaaaaataaaagaagaggagaagaacatggaggaa
cagtcaaaggaattggaaagccttcctccacctacagttccagcagatgaaaacatgatg
aaaatggagaaagtggaagaaaaggaaattataaaactgccagtcatagtaaagctagaa
aaaccttcagaaaacagtgaggaaaagcagattaccaaagaagaaaatgattcctttaaa
gaaaatgtcaagcctgttaaagcagaagtgaaggaaaataaagtagaaccaaaagattta
aaagacattaaaagcagcacagataaaataacagtacatgagcctgagagattagagttt
tgtgtcaatgtcaaaacccctcaagaagttgtggataaatctgcagaagaaagtgagaaa
cttaaaaatgaccagcaggcaaagataccactgaaaaagcgagagatcaagctgacagat
gactatgacagcccaataaaggggtccttgtgtaaatgtgttactccaacaaaggatgtc
ttgaaagaggaaggaaaaccagaggaggagggttttagaagagtgcctacaatcactgct
ttatgtcctgatgggaaattgctagtaaatggagaggttaccagtgaaaaagtcgcccaa
aatgtcacccaaaataataagtcagaacattccattagcacaaaggaagacagcagcagc
tcatcgaaggagaaaaattgcataagtggggggaaaatatcagactctttaaactctgtt
agcaaaattgtgaaaacatatgaagatgagaaaaatgtgcctaccgacaaagaggtagct
gctacgatctctgaggtttctaatcagaaagtgcctttaaaggaggaatctagtcttatg
gaaaaagagtccctcgacagtatgacttctgaggtggcaatggaggactcgtggaaagca
ggatactgccccaagaaacctgaagagaaattagctttgaaaactaggaaggacagacga
ccaccactcaaagaatgtttagaaaagctggaaaagtccatgaagacatccactcctaag
gagccacccaagcttgatctaacagatgaagagggtttgaaaagtaaaaatgaactggag
aagaaatctgactctccaaaagcagctgaaacacctccatcatctattcctcctgttcct
tccgagaaatctgctttagaaaaagagggctcagattccaaaaacatacttcctgatgaa
agcaaagttcaggaaggatcagatttagaaaaacaaaaggaggaattcgaagttccccgg
acagaaccagataaacaagataatgcccaaacctctaatatagaggagtctccagagact
aaaaaggaatctccagtacaaaaaagcaaatttaaatataaactggtttctgaagagaac
atctgtgtaacagataacaaggaaataacctccgagaggcagaaggaagggatcaagtta
accatcaggatctccagtagaaagaaaaagcctgatccacctccgaagactcaggacacc
gagcagaaggaagaggaagaagtcaatgttggtcgcactttaaggaggtctccaagaata
tctaaacctactccaaaagtggtggagactcgggatcagaaaactgacaaaaaacgaggt
gaagaagaggaggagaaattggcagcgctgcaaaagcaagaccgaagagaggatgtgaaa
aaacaagagaaggagtccaattctaaagtgagcaaggtcacacagagaagcaaagtgcgg
tggacaggaactcgaactcgtggcaggtggagatattcaagtaatgaagacagtgaggag
tctgagaccgaagaaaactctgaggaggaatctgaggggggagaggaagaagaggaacct
gcacctgctgatgatgatgaaccatgcaagaagtgtggccttcccaatcaccctgagcta
attctgttgtgtgactcttgtgacagtggataccacacagcctgccttcgacccccattg
atgataatcccagatggagagtggttctgcccaccttgccaacataaattactctgtgag
aagttagaagaacaattgcaagatctggatgttgtcttgaaaaagaaggagcgggcagag
cgaaggaaagagcgattggtgtatgtgggtatcagtattgagaacatcatcccaccacaa
gagccagaaataccagaaagtcaggaagaaaaaaagaaagattccaaaaagtcaaaatca
aaacggcttgaaaggaggtctactagaacacggaaatgcataagttacagatttgatgaa
tttgatgaggcaattgatgaagcaatagaagatgatatcaaggaggccgatggaggaggt
ggtggcagaggcaaagacatgtctaatatcacaggtcaccggggaaaagacatttccacc
atcctagaggaagaaaggaaagaaaataagcggccacaaagggccgctgcagcacgtcgc
aagaaacgacggcgactgaacgacctcgatagtgatagtaacctggatgaggaagagagt
gaggatgagttcaggatcagcgatggatctcaggacgagtttgttgtatcagaggaaaat
ccagatgaaagtgaagatgatcagctgtcaaacgaagacagcgatacagagttctgtgcc
cgtagacccaggcgacaccactccaggccaatgagacaaagcaggcggttacgaagaaaa
acggtaaagaaaaaatattcagaggatgatgaagaggaagactctgaggacaatttaagt
agggagtctgaaagtggtgattacacagattacagtgatgatgattacctggaaactagg
cggagaagatcaaggcggaatcagaagagacaagttaactataaggaggattcagaaagc
gatggctcacagaaaagtgttcgatacggaaaggagctaagacgacttcataaacgcagg
cttcccagttcagacagtgaagagagctacatgtccaagaactctgaagatgatgaacca
gcaaaggaatcaaagcagtctattcgaaaacgtagccgaagtacagacgaatactcagaa
gaagaagaagaggatggggatgaaccagaggaggggagacctgtccgcaaacggctgaat
cgaattgaaacagatgatgaagataactgcgacaatgcgaacaaagatgcagaaaagcct
gcacctgcaaataagccatcagcacctcatgctcctcatgacagtaccaagaagccctgc
taccggatagaaagtgatgatgaagatgactttgataatgtagggaaagtagaaagcccg
ttggactacagcctagtggacttgccttccaccaatggacagagcccaggtaaaactatt
gaaaccttgattggcaaaccaagtgagaagactcaagcccccaaggacagcacagccaat
gccaacctggcacccaatgggacggggggtgggcaggaggtagtagggccagaggaagag
gaggatgaacttttgagagtgactgaccttgttgattacgtctgtaacagtgaacagtta
taa
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integrated database retrieval system
