Trachemys scripta elegans (red-eared slider): 117871331
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Entry
117871331 CDS
T07347
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117871331 (LCMT2)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
117871331 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
117871331 (LCMT2)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117871331 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_KLHDC2_KLHL20_DRC7
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_2
Kelch_1
Kelch_6
Motif
Other DBs
NCBI-GeneID:
117871331
NCBI-ProteinID:
XP_034615095
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All DBs
Position
1:complement(335965155..336056182)
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AA seq
685 aa
AA seq
DB search
MGRSGRGRRAARDEAIQGTNDSSIVSKCSTAALGYIQDGFLQYFVTKRCRRAPLIHWGYY
VQARAVDRCVREFLRQSQGHPRRQILSFGAGFDSLYFRLKAVGLLSCTVVYEVDFPSVAS
RKAALIKGTKDLAMVVGGVGGRESGAMSFAVEDYKLLGVDLSELSKLEQALKEAGLDPEV
PTMLLAEVVLTYMEISRSDALIQWAAQHFPCAQFVVYEQMHPEDPFGRIMQQHFSQLNSV
LHALAQYPDCEAQRRRFLQRGWAKCSVLDMNEFYASFIPEDERRRVQALEPFDEYEEWHL
KCSHYFILAASKGKELGWTPLFSKMPAFSADDPPRVAGSISASVCSIDCEIAGLRRYGHH
SVLIKPHVILTTGGFGEQDGRHHRLRDFHVLVRHEDNWRVGSVRMEKSGNAWGGRLFHTV
TCVSGSQALAVGGRMSPTNADLGILWLRFPESMTASDPDCVVVELVSPQPAEDLASSRWR
HTTTEVMCQGQKYLFIYGGRSAVQPVLGDWYFLYLEEFSCRRIPVGGPVPEGRHSHSACS
WDGGALIAGGLGAAGQPLNSVLFLRPTGSGFQWQDVETHPPFIPRYSHTAHVHDGKLLLV
GGVWLHSASVPGVTVIDLMTGFSLDYQIDTVSLKWPLMLHNHSSIFLPDKRELLLIGGGG
NCFSFGTHLNLHPICLGLSNILTSQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggagcgggagggggcggcgcgcggcgcgggacgaggcgattcagggcactaac
gacagcagtattgtcagtaaatgctccaccgctgctcttggctacatacaggatggattc
ctacagtacttcgttaccaagagatgcagacgagcaccgctgattcattggggttactat
gtccaggcccgagctgtggatcgttgtgtgcgagagtttctgcgacagagtcaaggccac
cccaggagacagatcctttcttttggtgctggctttgactccctgtatttccgcctcaag
gctgtgggtcttctgagttgcactgtggtatatgaggtagatttcccaagtgtagcaagc
cgaaaagctgctctgatcaagggtacgaaggacctggccatggtcgtgggaggagttgga
gggagagaatcaggagccatgagctttgctgtggaggattataaattgctgggagtggat
ttatctgagctgtctaagctggaacaagccctaaaggaggcaggcctggaccctgaggtt
cccaccatgcttttagcagaagtggtgctcacttacatggagatcagcaggtcggatgct
ttgatccagtgggcagctcagcacttcccctgtgcacagtttgtggtctatgagcagatg
caccccgaggacccctttggtcgcatcatgcagcagcacttcagccagctgaattctgtg
ctgcatgccctggcccagtatcccgattgtgaggcgcagaggagacgctttctccagcgg
ggatgggccaagtgcagtgtccttgatatgaatgagttctacgccagctttatccccgaa
gatgagcgacggagagtgcaggctctggagccctttgatgaatatgaggaatggcacctg
aaatgttcacattactttatcctggctgcatcgaaggggaaagagcttggctggactcct
ctattctccaagatgccagctttctctgctgatgaccctcctagagttgctggtagcatc
tctgcatctgtgtgctcaatagactgtgaaattgctggcctgaggcggtatggccaccac
tctgtacttatcaaaccacatgtgatcctcactactggaggcttcggagagcaggatgga
cgacaccaccgcctaagagatttccatgtcttagtcagacacgaggacaactggcgtgtt
ggaagcgtgagaatggaaaagtctggtaacgcttggggtggacggttgttccatactgtg
acgtgtgtttctgggagccaggccctggcagtgggagggcgaatgtccccaacgaatgca
gatttggggatcctttggctaaggtttcctgaatccatgactgcctcagatccagattgt
gttgtggtggaacttgtgagcccacagcctgctgaggacctagcttcatcgcgctggaga
catactacaaccgaagtgatgtgccaaggccagaagtacctgtttatctatgggggccgt
tctgctgtgcagcctgtcctgggggactggtatttcctgtatttggaagaattctcctgc
agaaggattcctgttggggggccagtccctgaaggccgtcactctcacagcgcctgcagc
tgggatgggggagcactcattgcagggggcctgggagcagctgggcaaccgttgaactca
gtgctctttctgagaccgactgggagtggctttcagtggcaggatgtagagactcaccct
cctttcatccccaggtattcacacactgcccatgtacatgatgggaaactcctgcttgtg
gggggagtatggcttcactctgcatcagtacccggtgtgactgtgattgacctgatgacg
ggtttcagcttggattatcagattgacacagtgtccctgaagtggccattaatgctgcac
aatcacagcagcatcttcctgccagacaaaagagagctgctgctcattggtggtggtggg
aactgcttctccttcgggacccatctcaacctgcaccccatctgcttaggtctcagcaac
atcctgaccagtcagtga
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