Trachemys scripta elegans (red-eared slider): 117871394
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Entry
117871394 CDS
T07347
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117871394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117871394
Membrane trafficking [BR:
tst04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117871394
Endosome - Golgi transport
Arf GTPase associated proteins
117871394
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117871394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
PH_11
PH_8
PH_3
PH_6
PH_13
Motif
Other DBs
NCBI-GeneID:
117871394
NCBI-ProteinID:
XP_034615218
LinkDB
All DBs
Position
1:complement(346483492..346601992)
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AA seq
1202 aa
AA seq
DB search
MSDKDDAETMRGRLRSERVNSLFSEDELIEDYYDQPAANDSSCWNDYGLSTLQSSGTVSS
RSSSMHSGSTEGLDAPAQLLPIIKAGWLDKNPPQGSYIYQKRWVKLDADYLRYFDSEKDT
YSKRFIPVTSIARVASIGDQKFEVITNNRTFAFRAESDADRNEWMRTLQQMVDERKFKGL
NRISLFQPPTGALDSVDKCGLLELRGFKNKLYVVVAGDKVFLYKNAEDYRQGIGITYIEM
NVGNVKDVDRRGFDLTTPYRIFSFSADSDQEKDEWVEAMQQSIAEALSNSEVAEKIWSVE
ANRLCADCGSPKPDWASVNLCVVICKRCAGEHRGLGPSITKVRSLKMDRKVWTEELIELF
CQVGNCVANQFWAANVPPSEAIHVASGSQERRRFLIAKYKEGKYRRYHPLFGNQEELNKA
LCATVTTSDLAETQSLVFCGAEVSCFSGDPDFPNPIALAEQAGQKLQMEFLLHNKSSEIP
RVEAGNSEEKQYSVILPSVTHNGFLFKTPSMAKLVHERKSREEFSRRWCTLNDSIFSYYE
NDRNAVPNGEIKMEEIVCLVNNPPDTHGYESTFEIYIESERLYLFGLENPEAIRKWVKSI
AKSFIHPRADELLSHDFERIGRLQYKGGLNLARAKEGWFALTQSVLYAFFEDSDKEEAVH
LKKLQELSVQGDSLVLVERRRTLYIQGERKLDFLGWVAAIQKAAGSSGDTLSEQQLTESD
IPVIVDRCIDYITQCGLTSEGIYRKSGQNSKTTSLLEMLRKDARRVRLKEGEHQVDDVSN
TLKRFFRDLGDGLFTKEFCQDWLKAAAIDNEEEKIGQYRQLLSSLPVVNRATVKALINHL
YRVQYFSEMNQMNTHNLAIVFGPTLFQTDGKDYKAGRVVEDLISRYVVIFSVDEQEMRKQ
QDEITAIIKMRIAGSSSGTQQAGDFICTVYLEEKKTEAEQHVKIPATMTAEELTFEILER
RKIDTKEKEYWSCFEVNEREEAERPLHYSEKVLPILHGLGTDSYLVVKKQLSMENMLIYL
ASRVSDSKHGMMKFREERNLLGLGLSTGFHDRYFILNNSCLRLYKEVRSLKQRMPAVENS
HRPEKEWPVKNLKVYLGIKKKLRPPSCWGFTVFYENEKHEKQQWYLCCDTQMELREWFAS
FLYVQNGGNVWPSESSKVRASRTQQDSRLGNISLIPLRGNENEMRNSVAAFAADPLTLLR
NV
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaggacgatgccgagaccatgagggggcggctgcgctcggagcgagtcaac
agcctgttcagcgaggacgagctcattgaagactattacgaccagccggctgccaacgac
agcagctgttggaatgactatggcttgagcaccctgcagtccagcggcaccgtctcctcc
cgcagctccagcatgcacagcggcagcacagaggggttggacgcccccgcccagctctta
cccatcatcaaagctgggtggctggacaagaacccgccccaaggctcatacatctaccag
aagcgctgggtgaagctagatgccgactacctccgctattttgatagcgaaaaggacacg
tactccaagcgcttcattccggtgacctcaatagcccgcgtggccagcatcggggaccag
aaattcgaggtgatcactaacaacaggaccttcgccttccgggctgagagcgatgcggat
cgtaacgagtggatgaggaccctccagcagatggtggacgagcggaagttcaagggcttg
aataggatatccctgttccagccgcccaccggcgccttggactcggtggacaagtgcggg
ctgctggagctgcggggctttaagaacaagctgtacgtggtggtggctggagataaggtt
ttcctgtacaagaacgctgaggattatcgacaggggatcggaatcacttatattgagatg
aatgtggggaatgtgaaggacgtggacagaagaggatttgatctgacgacgccttacagg
atcttcagcttctcggcagactcggaccaggagaaggacgagtgggtggaggccatgcag
cagtccatcgccgaggccctctccaactcggaggtagcggagaagatctggtcggtggag
gcaaaccggctctgcgcagactgcggatcgcccaaacccgactgggcctccgtcaacctt
tgtgtcgtcatctgcaagagatgcgcaggagaacatcgggggctggggccgagcatcacc
aaagtgcggagcctgaagatggacagaaaggtgtggacggaggagctgatcgagctgttc
tgccaggttgggaactgcgtggcgaaccagttctgggcagccaacgtgccccccagcgag
gccatccatgtggcgagcgggagccaggagcggagacgcttcctcatagccaagtacaag
gagggcaaatatcggcgctaccacccactcttcgggaaccaggaggagctcaacaaggcc
ctgtgtgctacggtgacgaccagcgacttggctgaaactcagtccttggtgttctgcggg
gcggaggtgagctgcttctccggggaccccgacttcccgaaccccatcgccttagccgag
caggctggacagaagctgcagatggaattcctgcttcataacaaaagctcagagatcccg
cgggtggaagcggggaacagcgaggagaagcagtactcggtgatcctgccgtccgtcact
cacaacggcttcctcttcaagacgccctccatggccaagctggtgcatgaacggaaatcc
cgggaagaattcagccgccgctggtgcaccctcaatgacagcatcttcagctactacgag
aacgaccgcaacgccgtgcctaacggcgagatcaagatggaggagattgtgtgcctggtg
aataacccacctgacacccatgggtatgagagcacatttgagatctacatcgaatcggag
agactgtacctctttgggctggagaacccggaggccattcggaagtgggtcaagtccatc
gccaagtccttcatccacccccgagcggacgagctgctgagtcacgacttcgagcggatc
ggacggctgcagtacaagggcggcctgaacttggcgcgggccaaggagggctggttcgcc
ctcacccagtccgtcctctacgccttcttcgaggacagtgacaaggaggaggctgtgcac
ctgaagaagctgcaggagctctccgtccaaggggacagtctggttctggtggagagaaga
aggacgctatacatccaaggggagaggaagctggatttcttgggctgggtggctgccatc
cagaaggctgcggggagctccggcgacacgttgtccgagcagcagctcacggagtcggac
attcccgtcatcgtagacagatgcatcgattacatcacgcagtgcgggctgacctcggag
gggatctacaggaagagcggccagaactccaagaccaccagcctgctggagatgctccgg
aaggatgcacgcagggtccggctcaaggaaggggagcaccaggtggacgacgtctccaac
acgctgaagaggttcttccgagacctcggggatgggctcttcaccaaagagttctgccag
gactggctgaaggcagcagcgattgacaatgaggaggagaagatcggccagtaccgccag
ctcctgagcagcctccccgtggtgaacagagccaccgtcaaagcgctgatcaaccacctg
taccgggtccagtacttctccgagatgaaccagatgaacacacacaacctggcgattgtc
ttcgggccgacgctcttccagacggatgggaaggactacaaggcggggcgcgtggtggag
gatctcatcagccgctatgtggtcatatttagcgtggacgaacaagagatgaggaaacag
caggacgagatcacagccatcatcaagatgcggatagccggctcgtccagtggaacccag
caagccggggacttcatctgcacagtgtatctggaggagaagaagacggaagcagagcag
cacgtcaagatcccagccaccatgacggcagaagagctgaccttcgagatcttggagcgg
aggaaaatcgatacgaaggagaaggagtactggagctgcttcgaagtgaatgagagggag
gaagcagagcggcccttgcactactctgagaaagtcctgcctatcttgcacggcctgggg
acggacagctacctggtggtgaagaagcagctgtccatggagaacatgcttatctatcta
gccagcagagtgagcgacagcaagcacggcatgatgaagttccgggaggagaggaacctg
ctggggcttgggctgagcacgggcttccacgaccggtacttcatcctgaacaacagctgc
ctgaggctctacaaggaagtgcggagcttgaagcagcggatgcctgccgtggaaaacagc
cacagaccagagaaagagtggccagtcaagaatctgaaagtctacctgggaattaagaag
aaacttcgccctccatcctgctggggattcacggtgttctatgaaaacgagaagcatgaa
aagcaacagtggtacctgtgctgcgatacgcagatggagttgcgggagtggttcgcatcc
ttcctctatgtacagaacggtgggaacgtgtggccctccgaatcctccaaggtgcgggcg
tcgcggacgcagcaggactccaggttgggtaacatctcgctcatccctctgcggggcaat
gagaatgagatgaggaacagtgtggctgcttttgctgctgatccgctaactcttcttcga
aacgtatga
DBGET
integrated database retrieval system
