Trachemys scripta elegans (red-eared slider): 117871609
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Entry
117871609 CDS
T07347
Symbol
NODAL
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04060
Cytokine-cytokine receptor interaction
tst04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117871609 (NODAL)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117871609 (NODAL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117871609 (NODAL)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Transforming growth factors (RSTK binding)
117871609 (NODAL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
117871609
NCBI-ProteinID:
XP_034615307
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All DBs
Position
2:complement(155336378..155341600)
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AA seq
428 aa
AA seq
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MPPRNMCGLELVCWALILMQLGTSELTGVSQQKDEQQLHTAGPSPGLKNLSTVRGFRHPH
PALRYPLYMMQLYRSLVIGNHLGQPTLETSALQESDSVLSLVARSSLQAGDHWTLSFDMT
SISGSHEVRLAELRVRLPSFPQSHNVTVDIYHSHERKHQGNQTRVDRLFLGTFTSSPAIS
HSSWRVFNITSLLQSWLHQGVASGNGKHADAQDSQGQEREERTGSDSNATGSMGVQNSSG
SSQTEPAVSHGVTDKVLLVVFSKDKPSAEPSRASTLIRTVETSKHVMIDNTAKELGNRRH
RRNKQERQRIKMADLSTPGLGEEGRSLCRRVDMIVNFEQTGWGSWIVYPKKYNAYRCEGE
CPAPVDETFKPTNHAYIQSLLKLYQPNRVPCPACAPVKMSPLSMLYYEKGEVVLRHHEDM
IIEECGCN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaggaacatgtgtggcttggagctggtgtgttgggctctcatcctcatgcag
ttgggcacgtcagagctgaccggggtctcacagcagaaggatgagcagcagttacataca
gcaggacctagcccagggctaaagaatttgtctacagtccgtggcttccggcacccacac
cctgctctccggtacccattgtacatgatgcagctgtacagatctctggtcattgggaat
cacctgggacagcccaccctggagacatcagcactgcaggaatctgactcagtcttaagc
ctcgtggctagaagttctctccaggctggggatcactggactctctctttcgacatgacc
tccatctccggcagccatgaggtgaggctggctgagctgcgggtccgcctgccgtccttc
ccccagtcccacaatgtgacggtggacatctaccacagccacgagcgcaagcaccagggc
aaccagacccgcgtggacagacttttcctgggcaccttcaccagcagtcctgctatcagc
cactcctcctggagagtgttcaacatcaccagcttgcttcagtcctggctccaccaaggg
gtggcctccggcaacgggaagcatgcagatgctcaggactcccaggggcaggagagggag
gagaggaccgggtcagacagcaatgccactggatcgatgggtgtgcagaattccagtggc
tccagccagacggagccagccgtgtcccatggtgtgacggacaaggtcctgctggttgtt
ttctccaaagataaaccttcagcagagccctcccgggcatccaccctcatcagaactgtg
gagacctccaagcatgtcatgattgacaacactgccaaagagctggggaaccgccggcac
cgtcggaacaagcaggagaggcaaaggattaaaatggccgacctctccaccccaggcctg
ggggaggaaggcaggtctctgtgcaggagggtagatatgatcgtgaactttgagcagacc
ggctggggaagctggattgtctaccccaagaagtacaacgcctaccggtgtgagggagag
tgcccagcgcccgtggatgagaccttcaaaccaactaaccatgcgtatattcagagtttg
ctaaagctgtaccagcccaaccgggtgccctgtccagcctgtgctccagtcaagatgagc
cccctctccatgctgtactatgagaaaggggaagttgtcctccgccaccatgaagacatg
atcatcgaggaatgtggctgcaactga
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