Trachemys scripta elegans (red-eared slider): 117871756
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Entry
117871756 CDS
T07347
Name
(RefSeq) PH and SEC7 domain-containing protein 4-like
KO
K12494
PH and SEC7 domain-containing protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117871756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117871756
Membrane trafficking [BR:
tst04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117871756
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
HTH_AT3G52170
Motif
Other DBs
NCBI-GeneID:
117871756
NCBI-ProteinID:
XP_034615411
LinkDB
All DBs
Position
2:140874618..140904962
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AA seq
611 aa
AA seq
DB search
MDPDGPSSHTEPMDLLAPYAAEAPGCRPGKSLFRIQDAIVFSDNYTDPGSALYAQSPSGP
EGHGVGSCSLEVAAGDCETSPEEFAGLGGGEMLCAVGNALGSEIPAVESPPPPAENPNAQ
DEGKNDAAQALFWSGILQAQLCMLDLQGELEKQEEPVAELSSWSRGPEDALSRAPAAQGL
PISWEPLDERATAASDSDDGQEAGPGRQEEENWSSEGEEEEEQCLFYNNPLFQESPGPAG
PSPSDGPAFWSAAEGDGAGSSDEADGAPQGEPVLDGQREEELSCPFAEATEPGAEDETPC
DFPAYTMHCSTWAPLVITERDIDGACSMAEDPEALGRPPDQLADEAVCHPPVVLCSAESG
ESWDHSGTRRLFCDRSSLAYRGWGAGCETKCGGADRTHLLLLVPVPLCSRWCCSCPRRHC
TGCPRQEDAGEKPGDLEVPQPDGVLLANGASGDQGAAQRLAARLYHLDGFKRSQVASYLR
KNNEFSRQVAEEYLIFFQFSGQTLDRALRFFLKAFVLTGETQERERILGHFSKRYHLSNP
DAFPSADAVHTLTCALMLLNTDLHGQNIGRSMTCHEFVTNLDGMRDGQNFPKDQLKALYY
SIRNEKLEWAM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggatccagacggcccttccagccacacggagcccatggacctcctggctccttatgcc
gcagaagctccaggatgtaggcctggaaaaagcctctttaggattcaagatgcgattgtg
ttctccgataattacacagacccgggcagtgccttgtatgcccagtccccctcgggccca
gagggccatggtgttggcagctgctccttggaagtcgctgctggggactgcgagacgtct
ccagaagaatttgctggcctggggggtggagagatgctgtgcgccgtggggaatgcactt
ggttcagagatccctgcagtggaatctccaccccctccagcggagaacccgaatgctcag
gacgaggggaagaatgacgctgcccaagcactgttctggtccgggatcctccaagctcag
ctgtgcatgctggacctgcaaggggagctggagaagcaagaagagcctgtcgctgagcta
agcagctggtcccggggccctgaggacgcactgagccgcgccccggctgcacagggcttg
cccatctcctgggagccgctggacgaaagagccaccgcggccagcgacagcgatgacggg
caagaggccggcccagggaggcaggaggaggagaactggtcatccgagggggaggaggag
gaagagcagtgcctcttctacaacaacccgctcttccaggagagcccgggtcccgcaggg
cccagcccctctgacggccctgccttttggagcgccgccgagggggacggcgctggttcc
agcgatgaggccgatggggctccccagggcgagccggtgttagatggccagcgggaggaa
gagctctcgtgcccctttgctgaggcgaccgaaccgggagctgaggatgagacgccgtgc
gatttccccgcctacacgatgcactgcagcacctgggcccccttggtgatcacggaacgg
gacatcgacggggcctgttcgatggccgaggacccggaggccctgggccgcccccccgac
cagctggcggatgaagccgtctgccaccccccggttgtcctgtgcagtgcggagtcgggt
gagtcctgggaccattcggggacgcgccggctgttctgcgatcgctcctccctggcctat
agggggtggggggctggttgtgagaccaaatgtgggggggcagaccgtacccacctgctg
ctgctggttcctgtgcctctctgcagcaggtggtgctgcagctgtcccagacgacactgc
actgggtgtcccaggcaggaggacgcaggggagaagccaggagatctggaagtgccgcag
cccgacggggtcctacttgccaacggggcctccggggaccagggggctgctcagcggctc
gcagcgcggctctaccacctggacggcttcaagaggtcgcaggtggcctcctacctcagg
aagaacaacgagttcagccggcaggtggcggaggagtacctcatcttcttccagttcagc
gggcagactctagaccgtgcgctcaggttcttcctcaaggccttcgtgctgactggagag
acgcaggagcgggagcggatcctcggacacttctctaagcgctaccatctcagcaaccct
gacgccttcccctcggcagatgctgtgcacaccctgacctgcgccctcatgctgctcaac
acggacctgcacgggcagaacatcggccgcagcatgacctgccacgagtttgtaaccaac
ctggacggcatgagggatgggcagaacttccccaaagatcagctcaaggctctgtactac
tccatccgcaacgagaagctggagtgggccatgtga
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