Trachemys scripta elegans (red-eared slider): 117871757
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Entry
117871757 CDS
T07347
Symbol
PAX8
Name
(RefSeq) paired box protein Pax-8
KO
K09293
paired box protein 8
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117871757 (PAX8)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117871757 (PAX8)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
HTH_SB
Motif
Other DBs
NCBI-GeneID:
117871757
NCBI-ProteinID:
XP_034615412
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All DBs
Position
2:complement(140910550..140927395)
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AA seq
468 aa
AA seq
DB search
MVGCVRHKLPEYGEVIPGLPWPARGWLCLSAGHGGLNQLGGAFVNGRPLPEVVRQRIVDL
AHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKR
QNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDNCVASKALSPGH
SLIPSSAVTPPESPQSDSLGSTYSISGLLGIAQASSDNKRKMDDSDPESCRLRMDTQSSA
SAARKHLRSEAFGQPPLEPLECPFERQHYPEAYASPSHAKGEQGLYPLPLLSSALDDGKA
ALTASNTSLGRGLAAPQPYAAVTDPHSPFLVKQETPEASSPSATPSSLSSAAFSDLQPGP
PFRAFPHCSVIYGQFPGQGLVPGREMVGSTLPGYPPHIPTGGQGSYASSAIAGMVAGSDY
SANAYSHSPYSTYGEAWRFPNSSLLSSPYYYSSASRAPAPPAAAYDHL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtcggctgcgttagacacaaactcccggaatacggggaagtaataccaggcctcccc
tggcctgcccggggctggctttgtctctcggcagggcacggcgggttgaaccagctaggc
ggggccttcgtgaacggccgcccgctgccggaagtggtcaggcagcgcattgtggacctg
gcccaccagggcgtgcggccctgcgacatctcccgccagctgcgagtcagccacggctgc
gtcagcaaaatcctgggcaggtactacgagaccggcagcatccggcccggcgtgattgga
ggctccaagcccaaggtggccacccccaaggtggtggagaagattggggactacaagcgg
cagaaccccaccatgttcgcatgggagatccgtgaccgcctgctggctgagggcgtctgc
gacaacgacaccgtgcccagcgtcagctccattaacagaatcatccggaccaaagtccag
cagccattcaacctcccgatggacaactgcgtggcctccaaagctctgagccctgggcac
agcctgatccccagctcagccgtgacccccccggagtcaccccagtcggactcgctgggc
tccacctactccatcagcggactcctgggcatcgcccaggccagcagcgacaacaagagg
aagatggacgacagcgacccagagagctgccggctcaggatggacacccagagcagcgcc
agcgccgcccgcaagcacctgcgctccgaagccttcggccagccccccctggagccactg
gagtgccccttcgagcggcagcactaccccgaggcctacgcctcccccagccatgccaag
ggcgagcagggtctctacccgctgcccctgctgagcagtgcactggacgacggcaaagct
gcgctgaccgcctccaacacgtcactcggccgcggcctggccgccccccagccatacgcg
gccgtgacggacccgcactcccccttccttgtaaagcaggagacccccgaggcctccagc
ccgagcgccaccccttcctctttatctagcgcagccttttcggacctgcagcctgggccg
cccttcagagccttcccccactgctccgtcatctacggccagttccccggccagggcctc
gtcccagggcgcgagatggttggctccaccctgcccggctaccccccgcacatccccacc
ggcgggcagggcagctacgcctcctccgccatcgctggcatggtggcaggcagtgactac
tctgcgaacgcctacagccattccccctactccacctacggtgaggcctggcgcttcccc
aactccagcctgctgagttccccatattattacagctctgcctcgagggcccccgcgccc
cccgccgctgcctacgaccacctgtag
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