Trachemys scripta elegans (red-eared slider): 117871781
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Entry
117871781 CDS
T07347
Name
(RefSeq) spectrin beta chain, erythrocytic-like
KO
K27409
spectrin beta, erythrocytic
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117871781
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117871781
Intermediate filaments
Intermediate filament-binding proteins
117871781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
117871781
NCBI-ProteinID:
XP_034615436
LinkDB
All DBs
Position
2:complement(163731885..163767757)
Genome browser
AA seq
1303 aa
AA seq
DB search
MTSTPDYDHLEIQQQYGRINARWEASDDELDNDNSSARLFERSRIKALADEREAVQKKTF
IKWVNSHLARMTCRISDLYLDLRDGRMLIKLLEVLSGEPLPKPTKGRMRIHCLENVDKAL
QFLKEKHVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIEDIIVQTPEGRETRSAKEALL
LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFKNLEHSNARHNLEHAFSV
AERQLGITQLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVMDHLMET
ERMIERYGGLASDLLTWIEQTITVLNSRTFANSLTGVQQQLQCFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQKAYTPHEGRLVSDINRAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLLAQDNFGCDLPAVEAAKKKHEAIETDTAAYKERVQA
IEEVARELEAENYHDIKRIKARKDNILRLWDYLLELLHARRQRLEKNLTLQQLFQNMLQG
INWMDEMKVRLGVFLPLQLTLWIDEKILTAQDASYDEARNLHSKWLKHQAFMAELASHQG
WLEKVDEDGRQLCREKPQFGAVVSQRLTELHQLWDKLQSTTEEKAQHLFDANHSDLYAQS
FSDLDRWIGEMETQLQSDEQGTDLTSTNRLLKKLMRLDEQVSRRKREMEELLSQAPPPRG
DVHEADSKQQSIERRFLDLLEPLGKRRKELESSRAKYQLNWDLADETLWVQERLPLARST
DHGANLQTVQLLMKKNQTLQKEIAGHSPRVEDVLRRAERTVAAADGDCSAVEERRRVLKE
SWSALQEETGRRWRRLQQANEAQQYYLDVGEAEAWISEQELYVVADEKPQDEESSIVMLK
RHLRQQRTMEDYGKNIKQLAGRAQTLLSAGHPEGEEIIRLQGRVDKQYAGLKDLAEKRRH
RLENMYHLFQLKREVDDLEQWIAERDLAASSQEMGQDYDHVTLLREKFRDFARETGSVGQ
ERVDNVNLVIEQLIDAGHSEAATMAEWKDGLNESWADLLELIDTRMQLLTTSYELHKYFY
DGTEILGLIQEKQRELPAELGQDAHTAESFHRMHTAFERDIRLLEGQVQQFREVAARLQT
AYAGEKADVIQRQEEEVVRAWKALLDACSGRRAQLVDTAEKFRFFSMVRDLLSWMESIAR
QIETQEKPRDVSSVELLMKYHQGIKSEIETRQKSFASCVDLGKKLLQRRHQAGAEIKEKL
LQLTEKRREMVEMWDRRWDWLRLCECHTGMSVVGAGWWAPGSC
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacccccgactacgatcacttggagattcagcagcaatacggccggatcaac
gcgcgctgggaagcctcggacgatgagctggacaacgacaacagctccgcacggctcttc
gagagatcccgcatcaaagctctggcagatgagcgggaagccgtgcagaagaaaaccttc
atcaagtgggtgaactcacaccttgctcgcatgacctgccgcatttccgatctctacctg
gacctccgagacgggcggatgctgatcaagctcttggaagtgctttcgggagagcccctg
cccaagcccaccaagggacggatgcgcatccactgcctggagaacgtggacaaggcgctg
cagttcctcaaggagaagcatgtgcacctggagaacatgggctcccacgacattgtggat
ggcaaccaccgactggtgctgggcctcatctggaccatcatcctccgcttccagatcgaa
gacatcatcgtgcagactccggaaggccgcgagacgcgctctgccaaggaagcgctgctg
ctctggtgtcagatgaagaccgcgggctatccccacgttaacgtgaccaacttcacctcc
agctggaaggacggcctggccttcaacgccctgatccacaagcacaggcccgacttgatt
gactttaagaacctggagcattcgaacgcccggcacaacttggagcatgccttcagtgtg
gccgagcggcagctgggcatcacccagctcctcgacccagaagatgtcttcacggagaac
cccgatgagaaatccatcatcacttatgtggtggcgttttaccactacttctccaagatg
aaggttctggcggtggaagggaaacgggtcggcaaggtgatggaccacttgatggagacg
gagaggatgattgagaggtacggagggctggcctctgacctgctgacctggatcgagcaa
accatcaccgttctcaacagccgcacgtttgccaactccctgacgggggtgcagcagcag
ctgcagtgtttcagcacctaccgcaccgtggaaaagccccccaagttccaggagaagggg
aatctcgaggttctgctcttcaccatccagtcccggatgcgagctaacaaccagaaagcg
tacacccctcacgaagggagactcgtgtccgacatcaaccgggcctgggaacggctggag
aaggcggagcacgagcgggagctggccctgagaaacgagctcattcggcaggagaagctg
gagcagctggccaggcgcttcgaccgcaaggcggccatgcgggagacgtggctgagtgaa
aaccagcgcctgctggcccaggataatttcggctgtgacctgccggcggtggaggctgcc
aagaagaagcatgaggccatcgagacggacacggcggcctacaaggagcgggtgcaggcc
atcgaggaggtggcccgggagctggaggcggagaactaccatgacatcaagcgcatcaag
gcccggaaggacaacatcctgcggctgtgggactacctgctggagctgctccacgcccgg
cgccagcggctcgagaagaacctgacgctgcagcagctcttccagaacatgcttcaaggc
atcaactggatggacgagatgaaggtgaggctgggggttttcctgcctttgcagctcacc
ctctggatcgacgagaagatactgacggctcaggacgcgtcctatgacgaagcccggaac
ctgcacagcaagtggctgaagcaccaggccttcatggctgagctggcctctcaccaaggc
tggctggagaaggtggatgaggacgggcggcagctgtgccgggagaagccccagttcggg
gcggtggtctcgcagaggctgacggagctgcaccagctctgggacaagctccagtcgaca
acagaggagaaggcccagcacctcttcgatgccaaccactcagatctgtacgcgcagagc
ttttccgacctggacaggtggataggagagatggagacgcagctgcagtcggatgagcag
ggcaccgacctgacaagcaccaacaggctgctaaagaagctgatgagactcgatgagcaa
gtgagcaggcggaagagagagatggaagagctgctctcgcaggcccctccacccagaggg
gacgtgcacgaggccgacagcaagcagcagagcatcgagaggaggttcctggatctcctg
gagcccttggggaagaggaggaaggagctggagtcgtccagagccaagtaccagctcaac
tgggatctggcagacgaaacgctctgggtgcaggagaggctgcccctggccagatccact
gaccacggcgccaacctccagaccgtgcagcttctgatgaagaagaatcagacactgcag
aaggagatcgcgggccattccccgcgggtggaggacgtcctgcgcagggccgagcgcacg
gtggcggcggccgacggggactgcagcgccgtggaggagcggcggcgggtgctgaaggag
tcgtggagcgctttgcaggaggagacggggaggaggtggcggcggctgcagcaggcgaac
gaggcccagcagtactacctggacgtcggcgaggcagaggcctggatcagcgagcaagag
ctctacgtggtggctgatgagaagccacaggatgaagagagcagcatcgttatgctgaag
agacatctccgccagcagcgcaccatggaggattatggcaaaaacatcaagcagctggct
ggcagggcgcagacgctgctctccgcgggccatccggagggggaggagatcatccggctg
cagggacgggtggataagcagtatgcggggctgaaggacctggcggagaagcgccggcac
aggctggagaacatgtaccacctgttccagctgaagcgggaggtggacgacctggagcag
tggatcgcggagcgcgacctggccgcctcctcccaggagatggggcaggactacgaccat
gtcacgctgctgcgggagaagttccgggactttgcgcgggagacgggcagcgtggggcag
gagcgtgtggacaacgtgaacctggtcatcgagcagctgatcgatgctggccactcggag
gccgccaccatggccgagtggaaggacgggctgaacgagagctgggccgacctgctggag
ctcattgacacgcgcatgcagctgctgaccacctcctacgagctgcacaagtacttctac
gatggcacggagatcctggggctcatccaggagaagcagcgggagctgcccgcggagctg
ggccaggacgcccacaccgccgagtccttccaccgcatgcacacggccttcgagcgcgac
atccgcctgctggaggggcaggtccagcagttccgggaggtagcagcgcggctgcagaca
gcctatgcgggggaaaaagccgatgtgatccagaggcaagaggaggaggtggtgagggcc
tggaaggccctgctggatgcctgcagtgggcggcgggcacagctggtggacacggccgag
aaattccgcttcttcagcatggtccgggacctcctgtcttggatggagagcatcgcccgg
cagatcgaaacccaggagaagcccagagatgtctcgtccgtggagttgctgatgaaatac
caccaggggatcaagtccgagattgaaaccaggcagaagagcttcgccagctgtgtcgac
ctggggaagaagctgctgcagcgcagacaccaagcaggcgccgagatcaaggagaagctg
ctgcagctgactgagaagaggcgtgagatggtggagatgtgggacagacgctgggactgg
ctccgcctgtgtgagtgccacacgggcatgtcggtggtgggggcgggttggtgggcacca
ggaagctgctag
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integrated database retrieval system
