Trachemys scripta elegans (red-eared slider): 117871812
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Entry
117871812 CDS
T07347
Symbol
RNF125
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF125
KO
K12170
E3 ubiquitin-protein ligase RNF125 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117871812 (RNF125)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117871812 (RNF125)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117871812 (RNF125)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117871812 (RNF125)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_C2HC_14
zf-Di19
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
117871812
NCBI-ProteinID:
XP_034615460
LinkDB
All DBs
Position
2:208788712..208814220
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AA seq
240 aa
AA seq
DB search
MEPAQLCAIVMSVASTGRMILWYLQNLKKSYGAYDDFMEGRLLWDIARTSSRSLVAFIEQ
IFCHSCIVTSLRNNTWTCPYCRAYLPSEGIPATDIAKKMKSVYQNCTECDTQVCLSEMRV
HLRTCEQYVEKYGPLQELGDTVTRYACPFCQCEXHEDDLMDHCLTYHRTERRAVYCPICR
LIPGGDPSYFSRNFIRHLQLRHTFNHEDYIDINIVEAALIENILYQSFLEYMQVNHPNST
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgcacagctctgtgctattgtcatgagcgttgcaagcacaggacgcatgatc
ctctggtatctgcagaacctcaagaagagctatggggcatatgatgatttcatggagggc
agattgctgtgggatatagcaagaaccagttcaagatcgttagtggcattcattgagcag
atattctgtcactcctgtattgttacaagtttaaggaataatacatggacatgtccttat
tgccgggcttatcttccttcggaaggaattccagctactgatattgccaagaagatgaaa
agtgtataccaaaactgcacagagtgtgacacacaggtatgtctgagtgaaatgagagtt
catttaaggacttgtgagcaatatgtagaaaaatatggacctctacaagagctcggagac
acagtaacaagatatgcctgtccattttgccagtgtgagntgcatgaagatgatctaatg
gaccattgtctcacttaccatagaacagaaaggagagcagtgtactgtccaatttgtcgt
ttaatacctggtggagatccaagctattttagcaggaattttataaggcatcttcaactc
agacacacattcaatcatgaagactacatagatataaacatagtagaagccgcccttatt
gaaaacattctgtaccagtcatttttagaatatatgcaagtgaatcatccaaacagcaca
taa
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integrated database retrieval system
