Trachemys scripta elegans (red-eared slider): 117871839
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Entry
117871839 CDS
T07347
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117871839 (TOP1MT)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117871839 (TOP1MT)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Topoisomerases
117871839 (TOP1MT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
117871839
NCBI-ProteinID:
XP_034615486
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All DBs
Position
2:complement(277946048..278001551)
Genome browser
AA seq
1304 aa
AA seq
DB search
MIANEELAEERDVGNHHQTDQTASSSVKTKNDSNRKRKNVSEQKGQEKEKKPRAEALNSQ
WEEAQRKDQPPALKEKRPPRSKEKPLQENVISSSLKQEEAAESEASSQKLEEKSKAPEEE
KAKHRQVETESVPTKTPASGQESAPRVLETAADGPDCNGQEVSHPREQEGEEGQPREGSA
ERSEHAPKKVRTGPEGKLLVTDNRDLVPRHQETKTNGVGGENAAFSGDLDGSVEEVDITA
KGSTKEEEGEKNTEWEPGSFIPEGHREEKRVKDRKRKREEEKERGSREQKETEVRKKEIK
EKRKRELKESKGGVSKKEEPKKEREGKDQEKRDGAEPSKAKREKGITEAISGKGEGPKEM
GTQEGRPRLKRAKKPKQLESGDDAEGLDGGAGDRREKEKRGSETAGEAENWANTGEDEIQ
TERGKNRTEDRERAEGEEKPAQQPARTAEDEEKRKGKDTEGEKKNVKANKEVKAGKNQKE
KGQEKREEKIKEAKNKREKREGEKNKEIEEKTGRKKTQKDKRVEDEQEMERAEDGAIEEQ
EGRDEKENEKRNDVEEERKRNKRMKDEKEIKEEEEDEQEGEGWERNERMGGEQEREEKEE
EMEKDETRETKEKQGKETNQAKKKNKERKAKDENKCTEEKGRKSKEKSKEVENEGGSRKR
KSKEEGDKKKNKKLKKEADEKEKKKEENKWKCWISGMFPRGGVLLRQALGHFHPHPGRGW
LSSLQSLIRQVSAAHKGVVSGKARWEEEKTDDGVKWKQLEHKGPYFAPLYEPLPDDVKFY
YDGKPMKLNVATEEIATFYAKMLDHEYTTKEIFQNNFFHDWRKEMTSEERKKIKHLEKCD
FKEMHKYFVDKNEARKALPKEEKQKLKEEADKIQEEYGYCILDGHREKIGNFKTEPPGLF
RGRGDHPKMGMLKKRIMPEDVIINCSKDSKTPEPPSGHKWKEVRCDNTVTWLASWTENIQ
NSIKYIMLNPSSKLKGEKDWQKYEVARRLKGVVNKIRSQYRADWKSREMKKRQRSVALYF
IDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEHVVEFDFLGKDSIRYYNKV
PVEKPVFKNLQLFMENKDPGDDLFDRLNTTVLNKHLQDLMDGLTAKVFRTYNASITLQEQ
LKALTDAEDNVAAKLLSYNRANRAVAILCNHQRATPKSFEKSMQNLQAKIDAKKEQLGEA
QMELKRAKADLKAKKDVKSKAAVEKKKKLLEKLQEQLLKLNVQATDKEENKQIALGTSKL
NYLDPRISVAWCKKFGVPIEKIYNKTQREKFAWAIDMADEDFEF
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgattgctaatgaagagttggcagaggagagggacgtcgggaaccatcaccaaactgac
cagacagcatcttcatcagtgaagactaagaatgacagtaacaggaaacggaagaacgtc
tctgagcagaagggacaagaaaaggagaagaaaccgagagcagaagctctgaacagccag
tgggaggaagctcagcgaaaggaccagccccctgcgttaaaagagaagagaccgccgaga
tccaaggagaagccgttgcaagaaaacgtcataagcagctctctgaagcaagaagaggct
gctgagagtgaagcctccagccaaaagctggaagaaaagtccaaagctccagaggaggag
aaggccaagcacagacaggtggagactgaatccgtcccaaccaaaactccagcttcaggg
caagagagcgctcccagagtccttgagacggctgccgatggtccggattgcaacggccag
gaagtttctcatccgagggagcaggagggtgaagagggccagcccagggaggggagtgcc
gaaagatcagagcacgccccgaagaaagtgagaactggccctgaagggaaactcctggtg
accgacaacagagacctggttccaagacaccaggaaacaaaaactaatggggttggtggt
gagaacgcggcgttctctggagatctggatggttcagtggaggaagtggacattacagcc
aaaggcagcacgaaagaggaagagggggagaaaaacactgagtgggagccaggttcattc
attcctgaggggcacagagaggagaaacgagtcaaagacaggaaaagaaaaagggaagag
gaaaaggagagagggagcagggagcagaaggaaacagaagtgaggaagaaagagatcaaa
gagaagaggaaacgtgaactaaaggaaagtaaagggggtgtgagtaagaaagaggaacct
aaaaaggaaagggagggaaaggaccaggagaagagagatggtgcagagcccagcaaagcc
aagagggagaagggaatcactgaagccatctccggaaaaggcgaagggccgaaggagatg
ggaacgcaagagggtcgccctaggttgaaaagagcaaagaaacccaagcagctggagagt
ggggatgatgcagagggattggatgggggggctggtgatcgaagggaaaaggaaaagcga
gggagtgagacagcaggggaggcggagaactgggccaatacaggagaggatgaaatacag
acggagagaggaaagaacagaacggaagacagagaaagggcagagggagaagagaagcct
gcccaacagccagcaagaacagcagaggatgaggagaaaaggaaaggtaaagacacagag
ggagagaaaaagaatgtcaaagcaaataaggaagtgaaggcaggaaagaaccagaaagag
aaagggcaggaaaagagggaagaaaagataaaggaagcgaaaaacaagagggagaaaagg
gaaggagagaagaacaaagagattgaagaaaagacgggaaggaaaaaaacacagaaggat
aaaagggtggaagatgagcaagaaatggaaagggcagaagatggggcaatagaagaacaa
gagggaagggatgagaaagagaatgagaaaagaaatgatgtggaggaagagaggaaaaga
aacaaaagaatgaaggatgaaaaagaaattaaggaagaggaggaggatgaacaagaggga
gaaggatgggaaaggaatgaaagaatgggaggtgaacaggaaagggaggaaaaggaagag
gaaatggagaaagatgagactagggaaacaaaggagaaacaaggaaaggaaacgaaccag
gccaagaaaaaaaacaaggagagaaaagcaaaggatgaaaataaatgcacagaagagaag
ggaagaaagagcaaagagaaatccaaggaggtggagaatgaggggggatcgaggaaaagg
aaaagcaaagaggaaggagacaagaagaaaaacaagaaattaaagaaggaggcagatgag
aaggaaaagaagaaagaggaaaacaagtggaagtgctggatttcgggcatgtttccgcgg
ggtggggtgcttcttagacaagccctgggtcattttcacccccatcctggccgtgggtgg
ctcagcagtctccagtctttgatacggcaggtcagtgccgctcacaagggagtggtgagt
ggcaaagccaggtgggaagaggagaagacagacgatggcgtgaaatggaaacagctggag
cacaaaggcccctactttgcccctctctacgagccgctccctgatgatgtcaagttctat
tacgacggcaaacccatgaagctgaatgtggccacggaggaaattgccaccttctatgca
aaaatgctagatcacgaatatactaccaaggagattttccagaacaacttcttccacgac
tggagaaaggaaatgacctcggaggagcggaagaagataaagcatctggagaagtgcgac
ttcaaagagatgcacaagtactttgtggacaaaaacgaggcccggaaagctttgcccaaa
gaggagaaacagaaactgaaggaggaggcagataagatccaggaggagtatgggtactgc
atcctcgacgggcatcgggagaaaataggcaacttcaaaaccgagcccccagggctgttc
cgtgggcgcggggaccaccctaaaatgggcatgctgaagaagaggatcatgccagaggac
gtcatcataaactgcagcaaggactctaaaacccccgagcctccatcgggtcacaagtgg
aaggaagtgcgctgtgacaacaccgtcacgtggctggcctcgtggactgagaacatccag
aactcgattaagtacatcatgctgaacccgagttccaagctcaagggggaaaaggactgg
cagaaatatgaagtagccagacgtttaaaaggtgtagtcaacaagatccgctctcaatac
cgtgcagactggaaatccagggagatgaagaaacggcaaagatccgtggctctttacttc
attgacaagctggccctgagagccggtaacgagaaggaagaaggggagactgcagacacg
gttggctgctgctccctgcgtgttgagcacattaagctgcacccagagctggacgggcag
gagcatgttgtggagtttgacttcctggggaaagactcgatccggtattacaacaaagtg
cctgtggagaaaccggtgttcaagaacttgcagttattcatggagaacaaagacccaggg
gacgacctgtttgacaggctgaatacaacggtcttgaacaaacaccttcaggatttgatg
gacgggctgacagccaaggtgttcagaacttacaacgcttccatcactctgcaggagcag
ctgaaagcgctcacggacgctgaggacaacgtggcagcgaaactcctctcgtacaaccga
gccaaccgagcagtggccattctgtgtaaccatcagagagccacgcccaagagctttgag
aagtcaatgcagaacctccaggccaagatcgacgccaagaaggaacagctgggcgaggcg
cagatggagttgaagagagccaaggctgatctcaaagccaaaaaagatgtgaaatctaaa
gccgccgtggagaagaaaaagaagctgctggagaagctccaagaacagctgctgaagctg
aacgttcaagccacggacaaagaggaaaacaagcagattgctctgggcacatccaagctg
aactatctggatcccaggattagtgtggcctggtgtaagaagtttggagtgcccatcgag
aagatttacaataagacccagagggagaagtttgcgtgggcgattgacatggctgacgaa
gactttgagttctga
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integrated database retrieval system
