Trachemys scripta elegans (red-eared slider): 117871903
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Entry
117871903 CDS
T07347
Symbol
CSPG5
Name
(RefSeq) chondroitin sulfate proteoglycan 5
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
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KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tst00535
]
117871903 (CSPG5)
Proteoglycans [BR:
tst00535
]
Cell surface proteoglycans
Others
117871903 (CSPG5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Chon_Sulph_att
Motif
Other DBs
NCBI-GeneID:
117871903
NCBI-ProteinID:
XP_034615614
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Position
2:2215578..2250964
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AA seq
729 aa
AA seq
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MGSAAGAAGGPCRRPALLLTLALVLAAGPGAAPASKRHPGRQNTTDAPGAGWEGPPSPPD
SGREQDPKSGELLRNVTGAGENSYTMAPSEAAGVKEFGRKTPADLPGLAAEGVGTAAAAS
ADQVSGLPGAGISVRYYPGGISEENNESSLCLGCPGGVDSQSAWPPKPLLAKDNEGAMEA
SSAVTSVAWPVNGEAIVLALSDTKGAPESTAPVPESQEEAGSGDQPARASPGGVWNPGAF
VALTVTPPTYRVPTEMAGTASSSAGPGLSSDSAERDLLLEAFREVVLQPPTPDGHAPELG
TQTQSITGLAQDSAQKEEPLELWLASSSSSPAQGALGYTDLTWLNTEVSPGPQLAVMPPV
DALKTPEPPSAQSVSEIIDIDYYDLFGGESQGRGGGLEGFPARGPGGADAPKRKLDDKTT
SWAIHELYDDFTPFDESDFYPTTSFYTDGDEDGEDDELDEEEEEEDGGGGLATDLEDENN
SKLPIPVTPKIQTTVQEAEPTSRRYVIPPLQTFIVSGGGATSRPRPAETSQDLSQTAVAA
GPGGENGTECRSGYVRHNNSCKSVCDIFPSYCHNGGQCYLVEGLGAFCRCNTQDYIWHKG
IRCESIITDFQVMCVAVGSAALVVLLLFMMTVFFAKKLYLLKTENNKLRKTKYRTPSELH
NDNFSLSTIAEGSHPNDDPNAPHKLQDSLKSCMKEEESFNIQNSMSPKHDNGKGEQDESG
VNCLQNNLT
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgctgccggtgccgccgggggtccctgccggagacctgccctgctgctgacc
ctcgccctggtcctcgccgccggcccgggggctgctcccgcgtccaaaaggcacccaggg
cgccagaacaccacggatgcgccgggggctggctgggagggccccccgtcacccccggac
agtggaagggaacaggaccccaagagcggagagctcctgagaaatgtcactggggcaggg
gaaaatagctacacaatggcgccctcggaggcagccggagtgaaggaattcgggagaaag
acacctgctgatctcccagggctggcagcagaaggcgtaggcacggctgctgcagcttcc
gcggaccaagtcagcggccttcctggagcagggatctctgtacggtattatcccggcggg
attagcgaggagaacaatgaatcgtcgctctgtttgggatgccccgggggggttgacagc
cagagtgcctggcccccgaagcctttgttggctaaggacaatgagggggccatggaagcc
tcgtcagccgtgactagtgtggcttggcctgtgaatggagaggccattgttttggcatta
agtgacacaaagggagcgccggagagcacggcccctgtccccgagagccaggaggaggcc
gggagcggagaccagcctgccagagcctctccgggcggcgtgtggaacccgggagctttc
gtggcactcacggtcaccccgcccacctaccgggtccccacagagatggcgggcacagcc
agctcgtcggcaggaccgggcctcagctctgactcagccgagagggacctgctgctggag
gccttcagggaagtggtgctgcagccccccaccccggatggccatgcccctgagctgggc
acccagacgcagagcatcacagggctggcacaggactctgcccagaaggaggagcccctg
gagctgtggctggcgtcgtccagcagctccccggcccagggggctctaggctacaccgat
ctaacctggctcaataccgaagtgtccccggggccccagttggccgtcatgccccctgtc
gacgctctcaagacccccgagcctccctcagctcagtcggtctctgagatcattgacatc
gactactacgacctctttggtggggagagccaaggcaggggtgggggcctggagggtttc
cctgccaggggccccgggggagcagatgcccccaagaggaaactggatgacaagacgacg
tcctgggccattcatgagctctacgatgacttcacacccttcgacgagtcagacttctac
cccaccacctccttctacacggacggggatgaggatggtgaagatgacgagctggacgag
gaggaagaggaggaggacgggggtggtgggctggccacggacctggaggatgagaacaac
tccaagctccctatcccggtcacgcccaagatccagaccacggtgcaggaggccgagccc
accagccgccgctatgtcatccccccgctgcagaccttcatcgtctctgggggtggcgcc
acctccagacctcgcccggcggagaccagccaggacctgagccagacggccgtggcggca
ggacccgggggcgaaaacgggaccgagtgcaggagtggctacgtcaggcataacaactcc
tgcaagtccgtgtgtgacatcttccccagctactgccacaacgggggccagtgctacctc
gtggagggcctgggcgctttctgcaggtgcaacacccaggattacatctggcacaaggga
attcgctgcgagtccatcatcaccgacttccaggtgatgtgcgtggccgtgggctcggcg
gcactcgtggtcctgctgctcttcatgatgaccgtcttcttcgccaagaagctctacctg
ctcaagactgagaacaacaagctgcgcaagaccaagtaccgaacgccatccgagctccac
aatgataacttttccctgtccacgattgccgagggctcccatccaaatgatgaccccaat
gctccccacaaactgcaggactctctgaaatcctgcatgaaagaagaggaatcatttaat
attcagaactccatgtcgcccaagcacgataatgggaagggcgaacaggatgagtccggt
gtgaactgtctgcagaacaacttgacatga
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integrated database retrieval system
