Trachemys scripta elegans (red-eared slider): 117871929
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Entry
117871929 CDS
T07347
Symbol
SNAP47
Name
(RefSeq) synaptosomal-associated protein 47
KO
K18212
synaptosomal-associated protein 47
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117871929 (SNAP47)
Membrane trafficking [BR:
tst04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
117871929 (SNAP47)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5089
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
117871929
NCBI-ProteinID:
XP_034615666
LinkDB
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Position
2:4760685..4794147
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AA seq
422 aa
AA seq
DB search
MNVDICIHAWPCSYYLNTEKRWVSGRLSLTPIVVRFTADKTGELLVSFHLSSISEIKKES
SSLIFSSLTILEKENTKHWFSSLQPNRNVVFNILEHFWREQLLSCPGAGAQADSLHTTKG
KELTGLLSASQKRMEDTTKVLHYQGEQFDNIMKGLNKIDSEMDVTDRLLTELESPSWWPF
RGKLWKGPLEAKPKEEAAISGSKNQEGVLIRIPVIITLGTNSNVMPGKFTLLVSGLEISD
CNSQVIHRFELKDVDDIKVHTPYEISIRQRFIGKPDISYKLLSAKMPEAIPILEMQFSKK
IQFLEDALGFAGARKSPQADLGNSIWQAATGRIVSVVQPGSSSEGGGGGGGGGQAQLQKQ
KQIMSESETQELKQILKKLKSLAIETDTELERQDEVLDVISTSVDQTTLNIDKQNRRMKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggacatatgtatccatgcgtggccctgttcctattacttaaacactgagaaa
cgatgggtctctggcagactctcactgactcctattgtggtcaggtttacagctgacaag
accggagagcttctggtcagcttccatctttccagcatcagtgagatcaagaaggagtcc
tccagtttaatattcagctccctcacaattctggagaaggaaaacaccaagcactggttc
agttccctccagcccaacagaaatgtggtcttcaacatcctggagcacttctggagggag
cagctgttgtcgtgtccaggggctggagctcaggcagattctctgcacacgacgaaaggg
aaagaactgactggtttactgtctgcatcccagaaacgtatggaggatacaacaaaggtg
ctccactatcagggtgaacagtttgataacatcatgaaaggactgaacaagattgactct
gaaatggatgtaacagacaggttgttgacggaacttgaatcgccttcttggtggccattc
cgtggcaaactctggaaagggccattggaagcaaagccaaaggaagaagccgcgatttca
gggtcaaagaaccaggaaggagtcctaatcagaattccagttatcatcaccctcggaacg
aattctaacgtcatgccaggaaaattcacgcttctggtttctggcctggaaatcagtgac
tgcaattctcaggtcattcaccggtttgaattgaaagatgtagatgatatcaaagttcat
acaccatacgagatcagcatccgtcagaggtttattgggaagccagacatctcttacaag
ctgttgtcagcaaagatgccagaagcaatcccaatcttggagatgcagtttagcaagaaa
atacagtttttggaagatgcactgggatttgccggtgcaaggaaatctcctcaggcagat
ctgggcaattccatttggcaagcagccacaggccgcatagtaagcgtggtgcaacctgga
tcctcatcggaaggaggcggaggtggaggtggaggtgggcaggctcagctgcaaaagcaa
aaacaaatcatgtctgagtcagaaactcaagaacttaaacagatactgaagaagcttaag
agcctcgccatagaaacagacacagaactggagagacaggatgaagttcttgatgtcatc
tccacctctgtagaccagacaactttgaatattgacaagcagaaccgcagaatgaagaag
ctaacgtag
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