Trachemys scripta elegans (red-eared slider): 117871982
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Entry
117871982 CDS
T07347
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117871982 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tst01007
]
117871982 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117871982 (GARS1)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117871982 (GARS1)
Enzymes [BR:
tst01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
117871982 (GARS1)
Amino acid related enzymes [BR:
tst01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117871982 (GARS1)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117871982 (GARS1)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117871982 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
DUF3993
Motif
Other DBs
NCBI-GeneID:
117871982
NCBI-ProteinID:
XP_034615789
LinkDB
All DBs
Position
2:complement(10952157..10985946)
Genome browser
AA seq
690 aa
AA seq
DB search
MDRPAAEALLDPLRQAVRLQGELVRKLKEEKAPQVDVDRAVAELKARKKILEAKELALQP
KDDLVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQAWRLHFIQEDQ
ILEIDCTMLTPEPVLKTSGHVEKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAE
KKTEMENVLTQLDNYSQQELADLFVNYNVKSPVTGNDLSPPVSFNLMFKTSIGPGGNMQG
YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF
VDPSEKYHPKFQSVADLHILLYSSKAQVSGQSAHRMRLGDAVEQGVINNSVLGYFIGRIY
LYLTKVGVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRACYDLSCHAR
ATKVPLVAEKLLKEPKTANVVQFEANKGAIGKAYKKDAKLVLEYLSICDECYISEMEKLL
NEKGEFTVETEGKTFKLTKDMVSVKRFQKTLHVEEIVPNVIEPSFGIGRIMYTVLEHTFH
VREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGISHKVDDSSGSI
GRRYARTDEIGVAFGITIDFDTVNKVPHTATLRDRDSMRQIRAEVSELPTIIRDLANGCL
TWADVEAKYPLFEGQETGKKETIEEDNYLK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacccgccgccgaggcgctgctcgacccgctccgccaggcggtgcggctgcag
ggggaactggtaagaaagctgaaagaagagaaggctccccaggtggatgtagacagagct
gtagcagagctcaaggctcggaagaagatcctagaagccaaggagctggctttacagccc
aaggatgaccttgtggacagaacgaaaatggaggacactctgaagcggaggtttttctat
gatcaagcttttgctatttatggaggtgttagtggcctgtatgactttgggcctgttgga
tgtgctttgaagaacaacattatccaagcttggagactgcactttatacaggaggatcag
attctagagatagactgcaccatgctcaccccagagccagttctgaagacctctggccat
gtagaaaaatttgctgacttcatggtgaaagatgtgaaaaatggggagtgttttcgggct
gatcatctcttaaaagctcacttgcagaagctgatgtctgacaagaaatgtacagctgag
aaaaagacagaaatggaaaacgttttaacacagttggacaactacagtcagcaagagctc
gccgatctctttgtgaattacaacgtgaagtctcccgtcacagggaacgacctgtcccct
cctgtgtctttcaatctgatgttcaagacctccattgggcctggaggaaacatgcagggt
tatctgaggccagaaactgcacagggaattttcctcaacttcaaacgccttttggaattt
aaccaaggcaaactgcctttcgctgctgcccagattggaaattccttcagaaacgagatc
tcaccccgttctggcctcatccgagtcagagaattcaccatggcagaaattgagcacttt
gtggatcccagtgagaagtatcaccccaagttccagagtgtggcagatctccacatcctc
ctgtactcctccaaagcccaggtcagtgggcagtccgcccacaggatgcgtctgggagat
gctgttgagcagggtgtgatcaataactctgtactaggttacttcattggcagaatctac
ctctaccttacaaaggttggtgtatccccggataagctgcgcttccgacagcacatggag
aacgagatggctcattatgcctgtgactgctgggatgccgagtccaaaacatcctatggt
tggattgagattgttggttgtgctgatcgcgcctgctatgacctctcctgccatgccaga
gccaccaaagttcctcttgtcgctgagaagcttctgaaagaaccgaaaacagccaatgtt
gttcagtttgaggcaaataagggagccattggcaaggcctacaagaaggatgcgaagctg
gtgctggaatacctttccatctgcgacgaatgttacatcagcgagatggagaagctgctg
aatgagaaaggggaattcactgttgaaactgaagggaaaacatttaaattaacgaaggac
atggtcagtgtgaagagattccagaaaacactgcatgtggaagaaatagtcccgaatgtg
attgagccctcattcggaattggaaggatcatgtatacagtgttggaacacacattccat
gtccgggagggagatgaacaacgaacgttcttcagcttccctgctgttgtagcgcccttc
aaatgctctgtccttcctctgagccagaatcaggaattcatgcctttcgtcaaggagcta
tctgaggcgctcactaggaacggcatctcccacaaagtggacgattcctccgggtccatt
ggccggcgctacgccaggaccgacgagatcggcgtggctttcggcatcacgatagacttt
gacacggtgaacaaggtgcctcacacagccactctaagggaccgtgactccatgcgtcag
atacgagctgaggtctctgaacttcctaccataatccgtgacctggcaaatggctgccta
acttgggctgacgtggaggcaaagtatccactctttgagggacaagagactggcaaaaag
gagacaatagaggaagacaattacctgaaataa
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