Trachemys scripta elegans (red-eared slider): 117872071
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Entry
117872071 CDS
T07347
Symbol
PARD3
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
tst04517
IgSF CAM signaling
tst04520
Adherens junction
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117872071 (PARD3)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117872071 (PARD3)
09144 Cellular community - eukaryotes
04520 Adherens junction
117872071 (PARD3)
04530 Tight junction
117872071 (PARD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117872071 (PARD3)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117872071 (PARD3)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
TPR_11
APG6
Motif
Other DBs
NCBI-GeneID:
117872071
NCBI-ProteinID:
XP_034615981
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All DBs
Position
2:26835933..27494251
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AA seq
1353 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNMKVFSLIQQAVTRYKKAIAKDPNYWIQVHRLEHGDGGILD
LDDTLCDVADDKDRLVAIFDEQDPHHGGDGTSASSTGTQSPEIFGSELGSNSVSAFQPYQ
ATSEIEVTPSVLRANMPLHVRRSSDPALIGLSTSVSDTNFSSEEPSRKNPTRWSTTAGFL
KQNTPGMPSSHDRKKDENYRSLPRDTSNWSNQFQRDNARSSLSASHPMVDKWLERQEQDE
DGTEEDNSRVEPVGHADSGLENTTNFSLDDMVKLVEVSNDGGPLGIHVVPFSARGGRTLG
LLVKRLEKGGKAEQENLFHENDCIVRINDGDLRNRRFEQAQHMFRQAMRTPIIWFHVVPA
ANKEQYEQLSQSEKNTYYSNRFSPDSQYIDNKSINNAGLQTLQIISRMSNQTDQTDSYSQ
LPHSVNSSGKPPSGLAPSPQKVLTSTTNSGYNTKKIGKRLNIQLRKGTEGLGFSITSRDV
PIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLTGKTQEEAVSLLRSTKMGGTV
SLLIFRQEETFHPRELSAEQSQSQIPKETKSEEEDLVLTPDGTREFLTFEVPLNDSGSAG
LGVSVKGNRSKENHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLLGKTNQDAME
TLRRSMSTEGNKRGMIQLIVARRISKCNELESPGSPPGPELPIDTILDDRERRISHSLYS
GIEGLSESPTRTAALSRIMGKYQLSPTVNMPQDDTVIIEDDRLPVLPPHLSDQSSSSSHD
DVGFGTTDVGAWAKATINESTDCTLSPDADPVLAFQREGFGRQSMSEKRTKQFSDASQLE
FVKTRKSKSMDLGIADETKLSTMDDQKTGSPTRDVGPSLGLKKSSSLESLQTAVAEVTLN
GDIPFHRPRPRIIRGRGCNESFRAAIDKSYDKPVADDDDEGMETLEEDTEESSRSGRESV
STASDQPSHSLERQMNGNQDKGDRKKAGKDKKKDRDKEKDKIKAKKGMLKGLGDMFRFGK
HRKDDKIEKTGKIKVQEALTSEEERIRMKQEQERIQAKTREFRERQARERDYAEIQDFNR
TFGCEADPVYAGMASYDSSTNSGTMTLNTRPQSPREGQTVEALYAQVKKPRNSKSSPVDS
IRSTPSNHDRIQRLRQEFQQAKQDEDVEDRRRTYSFEQPWPNSKTYSQSGRHSVSVEVQM
QRQRQEERESFQQAQRQYSSLPRQSRKNASSVSQDSWEQSYSPGEGFQTAKENPRYSSYQ
GSRNGYMGGHGFNARVMLETQELLRQEQRRKEQQLKKKTSSEGPNNYDSYKKIQDPNYVP
PKGPFRQDVPPSPSQVARLNRLQTPEKGRPFYS
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacggtgtgcttcgggcggacccgggtggtcgtgccctgcggggacggcaac
atgaaagttttcagcctcatccagcaagcggtgaccaggtacaagaaggcgatcgccaag
gatccaaactattggatacaagtacatcgcctggagcatggggatggaggaatcctggac
cttgatgacactctttgtgacgtagctgacgacaaagacagactcgtagccatatttgat
gaacaagatccacatcatggaggtgacggcaccagtgctagctcgacgggcactcaaagt
ccagagatttttggcagtgaacttggctccaactctgtgtcagcctttcagccttatcaa
gcaacaagtgaaattgaggtcacaccttcagttcttcgtgcaaatatgcctcttcatgta
cggcgtagcagtgaccccgcgttgattggcctctcgacttctgtaagcgatactaatttt
tcttcagaagaaccttcccgaaaaaaccccacaagatggtccacaacagcaggcttcctg
aagcagaacacccctgggatgcccagtagtcatgacagaaagaaagatgaaaactacaga
agcctaccacgggatactagtaactggtctaaccagtttcagagagacaatgctcgctca
tcgttaagtgccagtcatcccatggtggacaagtggctggagaggcaagaacaggatgaa
gatgggacagaagaggacaacagcagagttgaaccagttggacatgcagacagtggtttg
gagaacactaccaatttttccttagatgatatggtaaagctcgtagaagtctccaatgac
ggcgggcctttgggaatccatgtagtgcctttcagtgcccgaggcggaagaaccctgggg
ttattagtaaaacgactggagaaaggtggaaaagctgaacaagaaaacctttttcatgag
aatgattgtattgtcaggattaacgatggagaccttcgcaataggagatttgaacaagca
cagcatatgtttcgtcaagccatgcgtacgcccatcatttggttccatgtggttcctgca
gcaaataaagagcagtatgaacagttatcccaaagtgagaagaacacgtactactccaac
cggtttagcccggattcccaatatatcgacaacaagagtattaacaatgctggacttcaa
acattacaaataatatctagaatgagtaaccagacagatcaaacagactcttactcacag
ctacctcatagtgtgaattcatcagggaaaccaccatcgggcctggctccatcacctcaa
aaagttcttacctccactacaaacagtggttataacaccaaaaagatagggaagagactt
aatatacaactgagaaaaggtacagaaggcttgggatttagcatcacttcaagagatgta
ccaattggtggctcagctccaatttatgtgaaaaacatccttccaagaggtgcagctatt
caagatgggagactaaaggctggagaccgacttattgaggtaaatggagttgatttaacc
ggcaaaacccaagaggaagctgtctccctgctgagaagcactaagatgggagggactgtg
agccttttgattttccgtcaggaagaaacattccatccaagggaactgagtgcagaacaa
agccagtcacaaattccaaaggaaacgaaatcagaggaagaagatcttgttcttacaccc
gatggcaccagggaattcctgacatttgaagttccacttaatgattctggatcagctggt
cttggtgtcagtgtcaaaggtaaccggtcaaaagaaaaccatgcggatttgggaatcttt
gtcaagtccattattaatggaggagcagcgtccaaggatggcaggcttcgagtgaatgat
cagctaatagcagtaaatggagaatcattattaggcaagacaaaccaagatgctatggaa
accctaagaaggtccatgtctacagaaggaaacaaacgaggaatgattcagcttatagta
gctagaagaataagtaaatgcaatgagttggagtcacctggaagccctcctgggccagag
ctgcctatagacactatactggatgacagggaacgtagaatttcccattcgctatacagt
gggattgagggtctcagcgaatcacccacaaggactgcggcactaagtaggataatgggt
aaataccagctgtctccaacagtgaacatgccacaagatgacactgttattattgaagac
gatagactgccagtacttccaccacatctttctgaccagtcatcttccagctcccatgat
gatgtgggatttggaaccacagatgttggcgcatgggctaaagccacaattaatgaatct
acagactgcactcttagtccagatgctgatccagtgcttgccttccagcgagagggtttc
ggacgccagagcatgtcagaaaaacgcacaaagcaattttcagatgccagtcagttggag
tttgttaaaacacgaaaatccaaaagcatggatttaggtatagctgacgagactaagctc
agtacaatggatgaccagaaaacaggttccccaacaagagatgtgggtccttcattaggt
ctgaagaaatccagctcattagaaagtttacagacggctgttgctgaggtgactttgaat
ggtgacattcccttccatcgtccgcgcccacggataatccgaggacgaggttgcaatgag
agcttcagagctgcaattgacaaatcatatgataaaccagttgcagatgatgatgatgaa
ggcatggagaccttggaggaagacacagaggagagttcaagatcaggcagagaatctgtg
tccacagcaagtgaccagccatcccattcattggagaggcagatgaatggaaaccaagat
aaaggggacagaaaaaaggctggaaaggacaagaagaaagaccgtgataaagagaaggat
aaaattaaggcaaagaaaggaatgctcaaaggcttaggagacatgttcaggtttggcaaa
catcgcaaagatgacaagattgagaaaactggtaaaattaaagttcaggaagcccttact
tcagaagaggagagaatacgaatgaagcaagaacaggagagaattcaagctaaaactcgg
gaatttcgagagagacaagctcgcgaacgtgactatgctgagatccaagattttaaccgg
acatttggatgtgaggctgacccagtgtatgctggaatggcttcatatgactcttccaca
aatagtggcacaatgactttgaacaccaggccccagagccccagggaaggacagacagtt
gaagcgttgtatgcccaagtgaagaaaccaagaaattcaaagtcttcacctgtagacagc
atccgatcaactcctagcaatcatgaccggatacagcgtctgaggcaagaatttcagcaa
gcaaagcaagatgaagatgtggaagaccgcagacgtacctatagttttgaacaaccatgg
ccaaactccaagacatattcacagagtggcagacactctgtatctgtagaagttcagatg
cagcgacaacgacaagaagaaagagaaagtttccagcaagctcagcgccagtatagttca
ttacccaggcaaagcagaaaaaacgcaagttctgtatctcaagattcctgggaacagagc
tactctcctggtgaagggttccagactgcaaaggaaaaccccaggtattccagctaccaa
ggatcaagaaatggctacatgggaggacatggcttcaatgccagggtaatgctggaaaca
caagaactgctccgtcaagaacagaggcggaaagagcaacaactgaaaaaaaagacatct
tctgaagggcctaacaactatgactcatataagaaaattcaagaccctaattatgtccct
ccgaaaggtcctttcaggcaagatgtaccaccttcaccatctcaggtagccaggctgaac
agattacaaactccagaaaagggaaggccattttattcttga
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