Trachemys scripta elegans (red-eared slider): 117872082
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Entry
117872082 CDS
T07347
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117872082 (ZEB1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
117872082 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
117872082
NCBI-ProteinID:
XP_034616025
LinkDB
All DBs
Position
2:complement(29181746..29380427)
Genome browser
AA seq
1105 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVETNSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHTVLPENSEKAGSTNSCWEDEDGKETKEILGPEAQADEAGCTVKEDEGDSEVENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKTSQCSSPSLSSSPGIPARPQIRQKIENKPLQEQLPINQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSQLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENSHTNLASKEQETINTASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPTNSCKSEKLPEDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYDPKNPTQLPQLSETEAEKSESPVLSETGESNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQGKLSNPTDND
NQAGPTNPSEPHDNTSDSQNSLKIIKSQTLSVGLTLNGSRSNTPSPSPLNLSSSRNSQGY
VYTTEGVPEEPQIEPLDLSLPKQHGEILERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DSSITDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
RVAYTYSTTVSPAVQETPPKQTQPNGNQDERQDTSSEGVSTVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEETGQEVLNNEHAGARASPSQ
IDSDERESLTREEEEDSEKEEEEEEDKEMEELQEEKECGKLQEVEEEERKIEGNMKNEES
VNQVSNVEQEAIQNDERVSEKTNKA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcaggcgaacccgaggcgcaataacgtt
accaattacaataatgtggtagaaacaaattcagattcagatgatgaagacaaattgcat
attgtggaagaggaaagtgtaacagatgcagcagattgtgatgctagtgtgccagaagat
gacttgccaacagaccatacagtattaccagaaaacagtgaaaaagcaggaagtacaaac
agttgctgggaagatgaagatggaaaagaaacaaaagaaatcctggggcctgaagctcaa
gccgatgaagctggatgtacagtaaaagaagatgaaggtgattctgaagtagaaaatgaa
caaaatcatgaccccaatgttgaagaattccttcaacaggaagatacagctgttatttac
cctgaagcacctgaggaggaccagagacaaggcacaccagaagctagtggtcaggatgaa
aatggaacaccagatgcattttcccaactgctgacctgcccatattgtgatagaggttac
aaacgctttacctctctgaaggaacacattaaatatcgccatgaaaaaaatgaggataac
tttagttgctcattatgcagttacacatttgcatatagaacacagcttgaacgccacatg
acatcacataaatcaggaagagatcaaagacatgtgactcagtccagtggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacatcacctaaaggagcatcta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaagcgtttttcccat
tctggttcatatagctcacacataagcagcaagaaatgtattggtttgatgcctgtgaat
ggtcgagcacggtcagggctcaagacgtctcagtgctcctccccttccctttcctcatca
ccaggtatcccagcgagaccacagatacggcaaaagatagaaaacaagcccttacaagaa
caacttcctattaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtt
gttgcttcaggaatcaactgttcaacccctttgcaaaatggggtttttagtggtggtagc
caattacaggcaaccagttctcctcagggtgtggtacaagctgttgttctaccaacagta
ggtctggtatctcccataagcatcaacttaagtgacattcaaaatgtacttaaagtggca
gtagatggtaatgtaataaggcaagtattggaaaacagtcatactaatcttgcatccaaa
gaacaagaaacaatcaacactgcatccatacaacaagctggtcattccctcatttcagct
atcagtcttcctttggttgatcaagatgggacaaccaaaattatcatcaattacagtttg
gagcaacctagtcaacttcaggttgtgccacaaaatctgaaaaaagaaaattctgttccc
acaaacagttgcaaaagtgaaaaattaccagaagatcttacagtgaagtctgagaaagat
aagaactttgaaggagagaccaatgatagcacttgccttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgacccaaaaaatcccactcagcttcct
cagctcagtgaaacagaagctgagaagtctgaatcccctgttctgtcagaaacaggggag
agcaacttatctcctggtcagccacctttaaaaaatcttttatctcttctaaaagcatat
tatgcattaaatgcacaaccaagtgcagaagagctctcaaaaattgcagattcagtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctgggcaaatttctgta
cagtcttctggaccatcttctcctgaacagggcaaactaagtaatcctacagataatgat
aatcaagcaggacctacaaatccaagtgaaccccacgacaacacaagtgattcacaaaac
tccctcaagataattaagtctcagactttatcagtgggattgaccctgaatggttcacga
agtaatacgccatccccatcaccactaaacctctcttcatccagaaattcccagggttat
gtgtacacaacagagggtgtaccagaagagccacaaatagaacctcttgacctttcacta
ccaaagcaacatggagaaatattggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttgacttgtgcaaaaaaagaaccacaaaag
gacagcagtattacagactctgatcctattgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccatgcttaagagctctagctgccaataagcaaaccattctgattcca
cgggtggcttatacatattcaactacagttagccctgcagttcaagaaacaccgccaaaa
cagacccaacctaatggaaatcaggatgaaaggcaagatactagctcagaaggagtctca
actgtggaagatcaaaatgattctgattcaacaccacccaaaaagaagatgagaaagaca
gaaaatgggatgtatgcttgtgatttatgtgacaaaatattccagaagagcagttcacta
ttgagacataagtatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaaaag
gcatttaaacacaaacaccatttgattgaacacatgcgactgcattctggagaaaagccc
tatcaatgtgacaaatgtggaaagcgtttttcacactctgggtcttattctcagcacatg
aatcatcgctactcctattgcaaaagagaagcagaagagcgtgatagcacagaacaggaa
gagacaggacaagaagtcctaaataatgagcatgctggtgccagagcatccccatcgcag
atcgactcagatgagagagaaagtttaacgagggaagaagaggaagacagtgaaaaagag
gaagaggaagaggaagacaaagagatggaagaacttcaggaagaaaaagaatgtggaaaa
ctacaagaagtagaggaggaagaaaggaaaattgaaggtaacatgaagaatgaagaatct
gtaaatcaagtgagcaatgtagaacaagaagctatacagaatgatgagcgggtgtcagaa
aaaacaaacaaagcttaa
DBGET
integrated database retrieval system
