Trachemys scripta elegans (red-eared slider): 117872147
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Entry
117872147 CDS
T07347
Symbol
NSUN6
Name
(RefSeq) tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117872147 (NSUN6)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117872147 (NSUN6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
FtsJ
PUA
PCMT
BMT5-like
Methyltransf_15
Methyltransf_25
Methyltransf_23
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
117872147
NCBI-ProteinID:
XP_034616210
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All DBs
Position
2:37850207..37887961
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AA seq
518 aa
AA seq
DB search
MSFFSKILLQREVEEYLGNVFRNKELISALGTLEAERKYESLLNRLSHPPAFTTVRVNTH
LASVKQVKNLLFEEIHKQFKGLSVPVLQHPQLQDILLIPVIGPRKDLQKQSSEVIVGAQC
GNSVLRGAHVFVPGIISASKCMKAGDVVSVYSDIEGKCKRGAKEFLGTKVFIGNGISELS
RSEIFSSNGSLNYISITLMSKEECAPLSLISILLKNKKQTITSQSSINCVTQKFSECLVK
RGIGVRMTDPVYLSPSLDNVLSSYLFLQNLPSAVVSHVLNPQPGERILDMCAAPGGKTTH
LATLMHDQGEVIAMDKIANKVKKIKQNAALLQLNCIKAFCCDGTKALAIGKKEDGQEGPP
FSAESFDRILLDVPCSGMGQRPNMAYFWTLKEVTSYQPLQRKLFSMAVKLLKPGGTLVYS
TCTITLSENEEQVAWALETFPCLQLQSQEPRIGGEGMMGAGLSLDQLKLLQRFDPSSVTS
RGMDINSLQDSREEDLILLANKDCIGFFIAKFIKLNSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttttttcaaaaatattactgcaacgagaagttgaagaataccttgggaacgtg
tttagaaataaggagctcataagtgctttaggcactctggaagcagagaggaaatatgaa
tctctgttaaatcgtctatctcatcctccagctttcacaactgttagagttaacactcac
ttggcttcagtgaaacaagtgaaaaatctgctgtttgaagagatccacaagcaatttaaa
ggtcttagtgtgccagttcttcagcacccacaactccaggacatcttactcattcctgtc
attggacccaggaaggatctacaaaagcaatcatctgaagtcattgttggagcccagtgt
gggaattcagtgctacgaggagcgcatgtctttgttccaggaatcatatctgcttcaaaa
tgtatgaaagctggagatgtggtctctgtatactcggatattgaaggaaagtgtaaaaga
ggagccaaagaatttctgggaaccaaagtttttattggaaatgggatttctgaattgagt
cgcagtgaaatcttcagttcaaatggctcactcaattacataagtataaccctgatgtct
aaagaggaatgtgcccctttatcattaatatcaatattgctgaaaaacaaaaagcagacc
atcaccagccaaagtagtatcaattgtgtcactcagaaattttctgaatgtcttgtgaaa
agaggaataggtgtaagaatgacagacccagtttaccttagtccttcgttggacaatgtg
ctgtccagttacttgtttttgcagaacttgccctctgcagttgtaagccatgttttaaac
cctcagccaggagagagaattctggacatgtgtgctgcacctgggggaaaaacaacccat
cttgcaacattaatgcatgaccagggtgaagtgatagccatggacaagatagctaacaaa
gtcaaaaaaatcaagcagaatgcagcattgttgcagctgaattgtattaaagcattttgc
tgtgatggaactaaggcacttgccattgggaagaaagaagatggacaagaaggccctcca
ttctcagcagagtcatttgatcgaattcttcttgatgttccttgtagtgggatgggacag
agaccaaatatggcctatttctggactctaaaagaagtgacgtcttatcagccattgcaa
cgtaagcttttcagcatggcagtgaaattgctgaagccagggggcactttggtgtatagt
acatgtacaattacactgtctgaaaatgaggagcaggtcgcctgggccctggaaactttt
ccctgcctccagcttcagtcacaggaaccacgtattggaggagaaggcatgatgggagct
ggattatcacttgatcagctgaagctgttgcagaggtttgatccatccagtgtgacgtca
cgtggaatggatattaactctttgcaggattccagggaagaagacctgatcttgctggcg
aataaagactgtataggattttttattgcaaaatttattaaattgaacagcaaatag
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integrated database retrieval system
