Trachemys scripta elegans (red-eared slider): 117872153
Help
Entry
117872153 CDS
T07347
Name
(RefSeq) macrophage mannose receptor 1-like
KO
K06560
mannose receptor, C type
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117872153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117872153
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tst04054
]
117872153
04090 CD molecules [BR:
tst04090
]
117872153
04091 Lectins [BR:
tst04091
]
117872153
Membrane trafficking [BR:
tst04131
]
Endocytosis
Phagocytosis
C-lectin receptors
117872153
Pattern recognition receptors [BR:
tst04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
117872153
CD molecules [BR:
tst04090
]
Proteins
117872153
Lectins [BR:
tst04091
]
C-Type lectins
Others
117872153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
CysR_MRC2_N
fn2
Xlink
Ricin_B_lectin
UL45
Chordopox_A33R
CD1107-like
DUF6669
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
117872153
NCBI-ProteinID:
XP_034616224
LinkDB
All DBs
Position
2:complement(38388515..38441347)
Genome browser
AA seq
1456 aa
AA seq
DB search
MTLSMLLVFISLIHSALQLLDNEIFLIYNKDLKSCVQAQSSNSVTTATCNQDTESQKFRW
VSDHQLMSVALRLCLGVPSKKDQVMITLYPCNKTSELQHWECRNETLLAIQGEDLFFNSG
SREKGNVMLQKESGVRSKWKVYGTTDDLCSRGYEDLFTLLGNANGAPCVFPFKLSGKWYA
ECTDTARSDGLLWCGTTADFDTDQLYGFCPLKYNETHRFWTTDPLTGTHYQINFQSALTW
HQARKSCQQQNAELLSITEIHEQMYLRDLIDRMRSALWIGLNSLNFNYGWQWSGGSPFRY
LNWDLGNPSLEPEKICVVLNPRKGAKWENRECDQKVGYICKRENSTLDSFSLPSEFSAAS
ECPEGWLPYTGHCYMIHREPKVWKEALASCRKEDGDLASIHNIEEHSFIVSQLGYKPTDE
LWIGLNDLRIQMYFEWSDKMPVIYTKWLHGEPTTTNSRQEDCVVMKGQDGYWADSVCDKK
FGYICKKSPLQDTPGTVKHIDPGCRKGWERHGFYCYLIGHTFVTFSEAKKTCERSKGYLT
TVGDRYEQAYLTSLIGLRPEKYFWIGLSDVEKQGTFKWTDGEEVLFTHWNSAMPGRKPGC
VAMRTGSAAGLWHVQDCEEKAKFLCKQPAEAMTLHPPVPEKKSYSKCPMGWDSNNNISSC
FKPFVREGNQKKSWLEARDFCREIGGDLAAINSEEEEEVIQHSIVDKGLSFRPFWIGLFC
LDPDEGFFWSDGSPMRYKNWYNTEPNNEHGIEYCGTVNEEFSMNWINTHCEHFNDWICQI
EKGTLLKPEQTNSPAKYEVTEDGWIIYGGKQYFFSTESVPLEKAREFCKKHFGDLVVIES
NSERKFLWKYILRNGKKESYFIGLILSVDQQFTWMDGSPVHYVAWAKHEPNYANAEENCV
VMYKSFGLWNDINCGNPNAFICERHGSGTVNATFAVTAPSPPGGCPESWLLFRNKCYKIF
GSRYEDRVMWIPARRTCVKFGGNLASIPNEQVQAFLTYHLKDAKTDTWIGLNDINSELNF
VWADGSGVYYTNWIAGSPVVGEIILYDSLRPETGNNLLQLDCVVVKTGPFDKIGQWKDEP
CFEDRGFICQMDSDPKLSHSPTIPASDFTRCGDSSYLVIRSKMKWEEAQKNCQEKSSELA
SILDPYSQAFLWLQVLEYGEPVWIGLNSNVTNGNYKWIDKWRMRYSKWASEEPKQTVACI
YLDLDGTWKTASCDQKYFSVCKQSDVMAPTDPPQLFGRCPESEEHRSWVHFHSHCYYIES
SYTKNWAQASRECTRLDATLASIEDHAESSFLSHRIKPLESKTTSFWIGMSKNVNGQWLW
RDNTAVDFVNWNEEEPSSYGNEKCVEMYASSGYWNDAQCSYKRGYICKKSESIKTGLTEK
PPERKGEKKDEEVSGSPTNITWLVIILVILILSGSGCAAYFYVKRKNQDNFLPIVTRMSD
TKESVDNQEQDEHAVA
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgactctctccatgttgctggtttttatctctctcattcacagtgctttgcagctactg
gataatgaaatatttttaatatataataaagacctcaagagctgtgttcaagctcagagt
tctaactctgtcacaactgccacttgcaaccaggacactgaatcacaaaaattcaggtgg
gtttctgatcaccagcttatgagtgtagcattgaggctatgcttgggagtgccttcaaag
aaagaccaggtgatgatcactctgtatccttgtaacaagacaagtgaactccaacattgg
gaatgcagaaatgaaacccttcttgcaatccaaggagaagatttgttttttaactctggc
agcagagaaaaaggaaatgttatgctgcagaaggaatcaggtgtgaggagtaagtggaag
gtctatggaaccacagatgatttgtgctctcggggctatgaagatttgtttacattgcta
ggaaatgccaatggggcaccctgtgtattccctttcaagctgagtggcaaatggtatgcc
gagtgtacagatactgccaggtcagatggcttgctctggtgtggaacaacagcagacttt
gacacagaccaattgtatggattttgcccattaaaatataatgaaactcacagattttgg
actacagaccctttgacaggcacccactaccagataaacttccaatcagctctaacatgg
caccaagcacggaaaagctgccagcaacaaaatgcagaattattaagtatcacagagata
cacgagcaaatgtatctgagagatttgattgacaggatgagatctgctctgtggattgga
cttaacagtctgaatttcaactatggatggcaatggagtggtggcagtcctttcagatat
ttaaactgggatctaggaaatccttctctggaacctgagaaaatctgtgtagtactaaat
cctagaaaaggtgctaaatgggaaaaccgtgaatgtgatcagaaagttggctatatttgt
aaaagggaaaactccactttggattctttctctcttccctcagagttctctgcagctagt
gaatgcccagagggctggttgccatacacaggtcactgttacatgattcacagggagccc
aaagtgtggaaagaagccttggcttcctgtcgaaaggaggatggtgatctggccagtatc
cacaacattgaagagcacagctttatagtgtctcagcttgggtacaagccaactgatgag
ctgtggattggtttgaatgacctcaggattcaaatgtattttgaatggagtgataagatg
cctgtgatatacacaaagtggctccatggagaaccaaccactacaaacagcagacaagaa
gattgtgttgttatgaaaggacaggatggatactgggcagacagtgtttgtgataagaaa
tttggatatatttgcaaaaagagtccattgcaagacactcctggaacggtgaagcacatt
gatcctggctgccggaagggctgggaaagacatggtttttactgttacttgattggacat
acatttgtaacattttcagaggcaaagaaaacctgtgaaaggagtaaaggttatctaaca
actgttggagacagatatgagcaagcctatctaacaagtctgattgggctcaggcctgaa
aaatatttttggatcggtctttcagatgtagagaaacaagggactttcaagtggactgac
ggtgaagaagttctgttcactcactggaattcagcaatgcctggaagaaagccagggtgt
gtagcaatgagaactggaagtgcagctggattatggcatgttcaggactgtgaagaaaag
gcaaaatttctctgcaaacaaccagctgaagcaatgacccttcatcctcctgttccagaa
aaaaaatcttactccaaatgccccatgggttgggattcaaacaataacatcagttcatgc
ttcaaaccttttgtgagagaaggaaaccaaaagaaatcatggcttgaagctcgagatttt
tgtagagagataggaggagatctggctgccatcaatagtgaagaagaagaagaagtgata
cagcattcaatagtggacaaaggactgtcatttcggcctttctggattggtttattttgc
ctggatcctgatgagggctttttttggagcgatggctctccaatgaggtacaaaaactgg
tataatactgaacctaataatgagcatggaattgaatattgtggaacggtcaatgaagag
ttttccatgaactggattaacacacactgtgaacattttaacgattggatttgtcaaata
gagaaaggaacactacttaaaccagaacaaacaaactctcctgccaagtatgaagtcact
gaagatggatggattatatatgggggcaagcagtattttttcagcacagaaagtgtcccg
ttggaaaaagctagggagttctgcaagaagcattttggagaccttgttgtcattgagagc
aatagtgaaagaaagtttctatggaaatatattttaagaaatggcaaaaaggagtcatat
ttcattggtttaattctgagtgtcgatcaacagtttacctggatggatggaagcccagtg
cactacgtagcctgggcaaagcatgagccaaactatgcaaatgctgaagaaaattgtgtg
gtcatgtataaaagctttggtttgtggaatgatatcaactgtggtaatccaaatgccttt
atctgtgaaaggcatggtagtggtactgtaaatgcaacatttgctgtgacagcaccttct
cctccaggagggtgtcctgaaagttggcttttgtttagaaataagtgttacaaaattttt
ggctccagatatgaagatagagttatgtggattcctgcacgtagaacttgtgtaaagttt
ggaggaaacctggctagcatacctaatgagcaagtgcaagctttcctcacttaccactta
aaagatgccaaaactgatacctggattggattgaatgatataaattctgagctcaacttt
gtttgggcagatggaagtggtgtctactacaccaactggattgcaggttcacctgtagtt
ggagaaatcatcctatatgattctctgcggccagagacgggcaacaatctgcttcagctg
gattgtgttgttgtgaaaacaggtccttttgataagatagggcaatggaaggatgaaccg
tgttttgaagacagaggatttatatgccagatggacagtgaccctaaactgtctcattcc
ccaacaattccagcctctgactttacccgttgtggtgatagtagctatttagtcatccgt
tccaaaatgaagtgggaagaggcacaaaaaaactgccaggagaaatcctcagaacttgcc
agtattttagatccctatagccaagcatttctgtggctccaggtgttagagtatggggag
cctgtatggattggtcttaacagcaatgtgaccaatggcaattacaaatggatcgataaa
tggagaatgaggtattctaagtgggccagtgaggaaccaaagcagacagtagcttgcatc
tatctagaccttgatggaacctggaagacagcatcttgtgatcaaaaatacttctctgtc
tgtaaacagtctgatgttatggcccctactgatcctccacaactctttggaagatgccct
gaatcagaggaacacagatcttgggttcatttccacagtcattgctactacattgagtcc
tcgtatacaaaaaactgggcccaggcttcccgagaatgcactcgattagacgctactttg
gcttctatagaagaccatgctgaatccagctttctgtcacataggataaagccacttgaa
agtaaaacaaccagcttttggataggaatgagcaaaaatgtgaatggtcaatggttatgg
agggacaacactgcagtggattttgtcaactggaatgaggaagagccttcaagttatggt
aatgagaagtgtgtcgaaatgtacgcatcatctgggtactggaatgatgctcaatgttct
tacaaaagaggatatatttgtaaaaaatcagaaagtattaaaacaggattgactgagaag
ccaccagagaggaaaggagagaaaaaggatgaagaggtttctggatcacccaccaacatc
acttggcttgtaattattctggtcattctgattctatcaggatctggatgtgcagcctat
ttctatgtcaagagaaaaaaccaagacaacttcttacctattgtaactcgaatgagtgat
acaaaagaatctgtcgataaccaggagcaagatgaacatgctgttgcctag
DBGET
integrated database retrieval system
