Trachemys scripta elegans (red-eared slider): 117872226
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Entry
117872226 CDS
T07347
Symbol
SGCE
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117872226 (SGCE)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
NIR_SIR_ferr
Motif
Other DBs
NCBI-GeneID:
117872226
NCBI-ProteinID:
XP_034616354
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All DBs
Position
2:complement(45987924..46044125)
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AA seq
486 aa
AA seq
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MQQRRQEERGAMQRCAPGPRPQSRRSGGALTTLLLTAFLLSSAEGINGTINWKTKQPNSY
IISRIRAAEKNVYTILSKVHSDRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDPI
TFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTIENVGKPTIIEITAYNRRTFETARHN
LIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSAL
DRGGRVPLPINDMKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRTE
FNIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSDTLKSRDYYSDFLITLAVPS
AVALVLFLILAYIMCCRREGVIQLVHHSAIQKSTKELREMSKNREIAWPLSTLPVFHPVT
GEIVPPLHTDSYDNTSMPLMQTQQNLPHQTQIPQQQTAGEFRMTTFQRFEVNGIPEERKL
TEAMNL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcggcggcaggaggagcgaggagccatgcagcgctgtgcgccggggccccgg
ccgcagagcaggcggagcgggggcgccctcaccaccctcctgctgacagcttttttgtta
agctctgctgaagggataaatggaacaattaactggaagactaagcaacccaacagttat
attatcagcagaataagggctgctgaaaagaatgtgtacacgattctctctaaggtgcac
tctgatcggaatgtatatccttctgctggagttctttttgttcatgttttggagagagaa
tactttaagggggagtttcctccttatccaaagcctggtgagataagtaatgatcctata
acatttaacaccaacttaatgggttaccctgacagacctggatggctacgctacattcag
aggacaccatacagtgatggagtgctgtacggatcaccaactatagaaaatgtgggcaaa
cctaccatcattgagatcactgcttataacaggcgcacctttgagactgcaagacataac
ttgatcattaatataatgtcagcagaagattttcctttaccatatcaagcggagttcttc
ataaagaacatgaatgtagaagaaatgttagcaagtgaggttcttggagattttcttgga
gcagtgaaaaatgtgtggcaaccagagcgtttgaatgctataaacatcacctcagctcta
gacaggggaggcagagttccacttcctattaatgatatgaaagagggtgtctatgttatg
gttggtgcagatgttccattctcctcatgcttacgagaagtggaaaatccacaaaatcag
ctgagatgcagccaagaaatggaacctgtaataacttgcgataaaaaatttcgtactgag
ttcaatattgactggtgtaaaatctctttggttgataaaacaaaacaagtttccacctat
caggaagtgatccgaggagagggaatattacctgatggtggagaatataaaccaccgtct
gatacactgaaaagcagagactattactcggatttcctaattacactggcagtgccctcg
gcagtagcactggtgctttttctaatacttgcttatatcatgtgctgccgacgggaagga
gtcatccagttggtccaccacagtgctatacagaaatccaccaaagagcttcgtgagatg
tccaaaaatagagagatagcatggcctctttcaacacttcctgtgtttcacccagttact
ggtgagattgtaccacctcttcacacagacagctatgataatactagcatgccactaatg
caaacacagcagaacctgccacatcagactcagattccacagcagcaaactgcaggagaa
tttcgtatgacaacatttcaaagatttgaggtaaatggtatccctgaagaaagaaaattg
acagaagcaatgaatttgtaa
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