Trachemys scripta elegans (red-eared slider): 117872233
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Entry
117872233 CDS
T07347
Symbol
DYNC1I1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04145
Phagosome
tst04814
Motor proteins
tst05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117872233 (DYNC1I1)
09142 Cell motility
04814 Motor proteins
117872233 (DYNC1I1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117872233 (DYNC1I1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117872233 (DYNC1I1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117872233 (DYNC1I1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117872233 (DYNC1I1)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117872233 (DYNC1I1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WDR55
Dynein_IC2
Beta-prop_EML
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
117872233
NCBI-ProteinID:
XP_034616383
LinkDB
All DBs
Position
2:46559048..46804141
Genome browser
AA seq
645 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEADQQQKKEPVQEDSDLDRKRRETE
ALLQSIGISPEPPLVQSLHDLTWDTCYFHYLVPTPMSPSSKSVSTPSEAGSQDSGDLGPI
GRTLQWDTDPSVLQLQSDSELGRRLHKLGVSKITQVDFLPREVVSYSKETQTPLATHQSE
EDEDDDEIVEPKARNDSEMENQEQKHEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRV
IERALAEDSDIFFDYSGRDVEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYP
ELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGT
YSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSL
DMLSTPQESMELSYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEIF
EGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMW
SPVHPALFACVDGMGRLDLWNLNNDTEVPTASVTIEGASALNRVRWAQAGKEVAVGDSEG
RIWIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGTVELSA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgatttaaaagctgagctcgagcgcaaaaagcagcgcctagcacaa
ataagagaggagaagaaacggaaggaagaagaaaggaaaaagaaagaggctgatcagcag
caaaagaaagagccagttcaggaagattcggatctagatcgcaaaagaagagagacagag
gctttattacagagcattggtatatccccagaaccacctctagtgcagtcgctgcatgat
ttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctcttcg
aaatcagtgagcaccccgagtgaagctggcagccaggattcaggagatctgggaccaata
ggaaggaccctgcagtgggacacagacccctcagtgctgcagctccagtctgactctgaa
cttggacgcagacttcacaagctaggtgtgtcaaagattacccaggttgatttcttacca
cgggaagtggtgtcctactccaaggagacacagacacctcttgctacacatcagtctgaa
gaggatgaagacgatgatgagattgtggaacccaaagcacggaatgactcagagatggaa
aatcaagaacagaaacacgaggtgaaagaagctcctcctagagaattgacagaggaagaa
aaacaacagattctccattcagaagaattcctgatatttttcgaccgaacaatacgtgta
attgagcgagctttggctgaagattcagacatattctttgactacagtggcagagatgta
gaagagaaagatggagatgttcaagccggagccaacctttcctttaatcgtcagttctat
gatgagcattggtcaaagcatcgcgttgtcacctgtatggattggtctcttcagtaccct
gaattgatggttgcttcttataacaataacgaagatgctccacatgagccagatggggtg
gccttagtttggaacatgaagtttaagaaaaccacaccagaatatgttttccattgtcag
tcctctgtgatgtctgtctgctttgcacgttttcaccccaacctggttgttggtggaaca
tactctggccaaattgtcctgtgggataatcgcagtcacaggaggactccagttcagcgt
acacccctttcagctgctgctcacacgcatcccgtatactgtgtaaatgtagttggaaca
cagaatgcgcacaatctcattacagtttctacagatggcaaaatgtgctcctggagcctg
gatatgctctcaacaccacaggagagcatggagctgtcctacaataaatccaagccggtg
gcagttacaggaatggctttcccaacaggagacgtcaacaactttgtggttggcagcgag
gagggtaccgtctacacagcttgtcgtcatggaagtaaagcaggaattggtgaaatcttt
gaaggccaccaaggacctgtcacggggatcaattgccacatggcagtgggcccaatcgac
ttttcccatctttttgtcacatcatcatttgactggacagtcaagttgtggaccacaaag
cacaacaagccgctctactcctttgaagacaatgcagactatgtctacgatgtcatgtgg
tcaccagtgcatcccgcgctctttgcctgtgtggacgggatggggcgcttggatctgtgg
aacctgaataatgacaccgaggttccaacagccagtgtgacaatagaaggagcttctgcc
ctcaatcgtgtccgttgggcacaggctgggaaagaggtagcagttggagattcagaaggc
cgcatctggatctatgatgttggagagctcgctgttccacacaatgacgaatggacccgt
tttgctcggacactggttgaaatccgtgccaacagagcggacagtgaagaggaagggact
gtagaattgtctgcctag
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integrated database retrieval system
