Trachemys scripta elegans (red-eared slider): 117872278
Help
Entry
117872278 CDS
T07347
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117872278 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117872278 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
BLOC1_2
DUF6395
Motif
Other DBs
NCBI-GeneID:
117872278
NCBI-ProteinID:
XP_034616457
LinkDB
All DBs
Position
2:complement(54753723..54910443)
Genome browser
AA seq
994 aa
AA seq
DB search
MLAETSLSIWGWGSLGVVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKTNSEKYLE
QCEHSFLPPTSVGIFKCTEEMKCEARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQNALIQFSTRSKEMDWQPYFTTRLVDDFATHLRVFRKAQQRIT
EKDDQMKGTAEDLVDTFFKVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNVIKLSDNV
GELEAVRDKAGEELQYLRSLDTAGDDINTIKNQINSLLYVVKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDNILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
LSRQKDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVNIDDSLVAKLAETLNHEEPTPE
IFDDIQRKVYDLMLRDERFYPSFKQNALYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
SSINLSLDDLSNVSSDESAQLHAYISDTGVCNDHGKTYALYAITVHRRNPTSEEIWKTYR
RYSDFHDFHMRITEQFENLASILKLPGKKTFNNMDREFLEKRKKDLNAYLQLLLNPEMMK
ASPALAHCVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTK
MSDNMGKMSERLGQDIKQSFFKVPPLMQKTDSDPEHCRVAAQLDDNVDDNIPLRVMLLLM
DEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDSMTSPEQVADAVKRFRDA
FWPNGILAETVPRRNKDIRMRTRVAGKTKLLEIMPDELKHIIGAETTRKGILRVFEMFQH
TQLNKRMVYVFLEGFLETLFPQYKFHELFSKLHSRSEQMQRYKQRLQSTQAPSLQKRSTY
CKLSPFPYDFQEGKDSTCGRFLPHSPIYVYFTRF
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagagaccagtctttccatatggggatggggaagccttggtgttgtgctcttt
ctagtaacttttggaccctttgctatattttactttgcgttttatatcctctgctttgtg
ggtgggggttttgtggttactctcttatttggaaaaacaaattcagaaaagtaccttgaa
cagtgtgaacactcatttcttcctccgacatctgttgggatttttaagtgtacagaagaa
atgaaatgtgaagccaggcctattaagattgacagaagattgacaggtgccaatataatt
gatgaacctttgcaacaagtaatccagttttcactgagggattatgtccagtactggtat
tatacactaagtgatgatgagtcctttcttcttgaaatcaggcaggctcttcaaaatgca
cttattcagttttctacgaggtcaaaagaaatggactggcagccttatttcaccacacga
cttgttgatgattttgccactcatcttcgagtattcagaaaagctcaacaaaggataaca
gaaaaagatgatcaaatgaaaggtacagcagaagaccttgtagatacattctttaaggtt
gaagttgaaatggagaaggaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggtgttactgtatttattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctcgcccgaggaattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaattgtaactatgaggccttcatgaatgttattaaattaagtgacaatgta
ggggagctggaagcagtaagagataaggctggagaagaactgcaatatcttcgatcctta
gatacagcaggagatgatatcaatactataaaaaatcaaataaacagcttattatatgtt
gttaaagtatgtgattcaagaatacagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggacaacattctggtagac
aatgttgcactacaattttttatggattacatgcagcagactggaggccaagcacatctc
ttcttctggatgacagtggaagggtacagggttacagcacagcaacagctggaggtatta
ctaagccggcagaaagatggaaagcatcagactaatcaaaccaaaggcctattaagagca
gctgcagttggaatttatgagcagtacttatcagagaaggcatctccaagagttaatatt
gatgactccttggtagcaaaactggcagaaacattgaaccatgaggaaccaacacctgaa
atcttcgatgacattcagagaaaggtgtatgacttgatgctgcgggatgaaagattttac
ccttcattcaaacaaaatgctctgtatgtgcgcatgttagctgaactggatatgctgaag
gatcctagtttcagaggatcagatgatggggaaggagaatcttttaatgggtcccctaca
agcagtataaatttgtccttagatgacctttcaaatgtctcttctgacgagtcagcacaa
ctacatgcatacatttcagatactggagtatgcaatgaccatggcaagacatatgcactg
tatgcgatcactgtacatcggagaaatccaactagtgaagagatatggaaaacgtatcgt
cgttacagtgacttccatgacttccacatgaggataactgaacagtttgaaaacctagca
agtatattgaagcttcctggcaaaaagacatttaacaacatggacagagaatttttagag
aagaggaaaaaagatttaaatgcatatttgcagttgttgttaaatcctgaaatgatgaaa
gcttccccagctttagcccattgtgtgtatgactttctggagaataaagcttacagcaaa
ggaaaaggagattttgctcgaaagatggacacatttgtaaatccactgcgtaactctatg
agaaatgtttcaaatgcagtcaagtccctgcctgacagcctggcagaggggatgactaaa
atgtcagacaacatgggcaaaatgtcagaaagattgggacaagacataaagcaatcattt
ttcaaggtgcctcctttaatgcagaaaactgattccgatcctgaacattgccgtgttgcc
gcacagcttgatgacaatgtggatgacaatattcctcttagagtaatgctgctccttatg
gatgaagtctttgatttaaaggagagaaatcagtggttaagaagaaatataaaaaatcta
cttcaacagcttattagagcaacatatggagacacgatcaatagaaaaatagttgatcat
gttgactcgatgacgtctcctgagcaagtagcagatgcagtgaaacgcttcagagatgcc
ttttggcccaatggcattttagcagaaactgttccacgcagaaacaaagatattagaatg
cgaacgagagtggcagggaaaactaaactactggagataatgccagatgaactgaagcac
atcataggtgctgagacaacacggaaaggcattcttcgggtctttgaaatgtttcagcac
actcaactaaataagagaatggtatatgtctttctggagggcttcctggaaaccttattt
ccacaatataaattccatgagctcttcagcaaactgcattcacggtcagagcagatgcag
agatacaagcagagactacaatctactcaagcgccttccttacagaaaagatctacatac
tgtaaattaagtcctttcccttatgatttccaggaaggcaaagacagcacatgtggaaga
ttccttccccatagccccatctatgtatatttcaccaggttctaa
DBGET
integrated database retrieval system
