Trachemys scripta elegans (red-eared slider): 117872281
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Entry
117872281 CDS
T07347
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117872281 (HDAC9)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117872281 (HDAC9)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117872281 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
117872281
NCBI-ProteinID:
XP_034616461
LinkDB
All DBs
Position
2:55098733..55625881
Genome browser
AA seq
1072 aa
AA seq
DB search
MHSMISSVDVKSEVPVGLEPVTPLDLRTDLRMMVPIVDPIMREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQELER
HRREQQLPPLRGKERGRERAVASTEVKQKLQEFLLSKSATKDSPTNGKNHSTSRHPKLWY
TAAHHTSLDQSSPPLSGASPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVTER
RSSPLLRRKDGNVVSSFKKRLFEVTESSVSSSSPGTGPSSPSNGPTGSMTENETSLLPSN
SQAEHLVSQQRILIHEESMNLLSLYTSPSLPNITLGLPAVQSQFSASSSLKEKQKCETQT
LRQGVALPGLYGGNMPPSSAQPHIALEGKPNSSHQALLQHLLLKEQMRQQKLLVTGGVPL
HPQSPLASKERVSPGIRVAHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQY
QQQIHMNKMLSKSIEQLKQPGNHLEEAEEELHGDHAMQEERAPSSGNSIRDDSCSICVDD
RIGQHVGAVKVKEEPLDTDDDNQTQQMESGEQAAFMQQQILEHQRIHQLQMYQAQMATVG
MAGLDKHRPVSRTQSSPAASTLPHPAMDRPIQPVYMTGVVYDSLMLKHQCMCGNYANHPE
HAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQLVHSEHHSLLYGTSPLNRQKLDPRK
LLGSVSQKIFSLLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAV
VRPPGHHAEESTAMGFCFFNSVAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPS
ILYVSLHRYDEGNFFPGSGAPNEVGRGLGKGYNVNIAWTGGLDPPMGDVEYLTAFRTVIM
PIANEFDPDIVLVSAGFDAVEGHDAPLGGYKVTAKCFGHLTQQLLKLAAGRVVLALEGGH
DLTAICDASEACVNALLGNELEPLPEDMLHQTPNMNAMASLQKATEIQSKYWKSVKPYPV
LVGCALAETQKQEREETETVSAMASLSVDVEQSFSQEDSRAAGEPMEEEPAL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtatgatcagctcagtggatgtaaagtcagaggttcctgtgggattggagccc
gtcaccccactggacttgcgaacagatctcaggatgatggttcccattgtggacccaatt
atgcgcgaaaagcagctccagcaggagctacttctgatccagcagcagcagcaaattcag
aaacaacttctgattgcggagtttcagaaacagcatgaaaacttgacccgacagcaccag
gcccagctccaggagcacatcaagttacaacaggaactcctcgccattaaacaacagcaa
gaactccttgaaaaggagcagaaactggagcagcagaggcaagagcaggagctagagaga
catcgcagggaacagcaacttcctcccctcagaggcaaagaaagaggccgagaaagggca
gtggcaagcacagaagtgaagcagaaacttcaagagttcctgttgagtaaatcagcaaca
aaagactctccaactaatgggaagaatcattccacgagccgccaccccaagctctggtac
acggctgcccaccatacctcactggatcaaagctctccacccctgagtggggcctctccg
tcatacaaatacactttaccaggagcacaggatgccaaggatgattttccacttcgaaaa
actgcctcggagcccaacttgaaggtgcgttccaggttaaaacagaaggtgacagaaagg
agaagcagccccttactcaggcggaaggatggaaatgttgtcagttcattcaaaaagaga
ctgtttgaagtgacagagtcgtcagttagtagcagttctccaggaacagggcccagctca
ccaagcaacggccctactggaagtatgacagaaaatgaaacctcacttttgccatctaat
tctcaagctgagcacttggtttcacaacaacgtattctgattcatgaagaatcgatgaac
ctgttgagtttgtatacttctccttctttgcccaacattaccttgggacttccagcggta
caatcccagttcagtgcttcatcttcactcaaagaaaaacagaagtgtgagacccagaca
ctgaggcagggagtggctcttcctggactgtatgggggaaacatgcctccctcttcagct
cagcctcatattgctctagagggaaaacctaacagtagccatcaggctctcctgcaacat
ttgttactgaaggaacaaatgagacagcaaaagcttcttgtgactggaggggttcctctc
catccacagtctccattagcatcaaaggagagagtctcaccaggcatcagagttgcccac
aagttgcctcgtcataggcccctgaatcgaacccagtcagctccactgcctcagagcact
ttggcccagctggtcattcagcagcagcaccagcagttcctggagaagcagaaacagtac
cagcaacagattcacatgaacaaaatgctctctaaatccatcgaacagctaaagcagcct
ggcaatcatctagaagaagctgaagaagagcttcatggagatcatgctatgcaggaagaa
agagctccctctagtggtaacagcattagggatgacagctgcagcatttgtgtggatgac
agaataggacagcatgtgggggctgtgaaagtgaaagaggagccactggacactgatgac
gataatcaaacccagcaaatggaatctggggagcaggctgcttttatgcaacagcagatc
ctggagcatcagcgtatccaccagttgcaaatgtaccaggctcagatggctacagttggc
atggcaggattagataaacatcggcctgtttccaggacccagtcttcccctgctgcttcc
acattacctcatccagcaatggaccggcccatccagcctgtctacatgactggtgttgtc
tatgacagtctaatgctgaagcaccaatgcatgtgtggcaactacgccaatcatcctgag
catgctggaagaatacaaagcatctggtcgaggctgcaagaaacagggttgctaaacaaa
tgcgagcgaattcgaggtcgaaaagccagtctggaggaaatacagctggttcactctgaa
catcattcactgctatatggcaccagccccctgaacagacagaagctggaccccaggaaa
ctcctaggcagcgtgtctcaaaaaatcttttccttgttgccttgtgggggacttggggtg
gacagtgacaccatttggaatgagctgcattcgtccggcgctgcacgcatggctgttggc
tgtgtcatcgaactggcttccaaagtagcctctggagagctgaagaatggttttgctgtt
gtaaggcccccaggccatcatgctgaagaatcaacagccatggggttctgcttttttaat
tcggttgcaattactgccaaatacttgagagacaagctaaatataggcaagatattgatt
gtagatctggatgttcaccatggcaatggtacacagcaggctttttatgctgaccccagc
atcctgtatgtttccctccatcgctatgatgaaggcaacttcttccctggcagtggagcc
ccaaatgaggttggaagaggccttggcaaaggatataatgtaaatattgcttggacaggt
ggcttggatccccccatgggagatgtagagtacctaacagcattcaggactgtgattatg
ccaattgccaatgagtttgatccggacattgtcctagtatcagctggatttgatgctgtg
gaaggccacgatgctccattaggcgggtacaaagtcacagctaaatgttttggtcaccta
acgcagcagttgctgaagctagcagctggccgtgtggtgctggcactggagggaggacat
gaccttactgccatctgtgatgcatctgaagcctgcgtaaatgcccttctaggaaatgag
ctggagcctctcccagaagatatgctgcaccaaacccctaatatgaatgcaatggcttct
ttacaaaaggccactgaaattcaaagcaagtactggaagtcagtgaagccgtatcctgtg
ctagtgggttgtgctctggctgagactcagaaacaagagagagaggagacggagactgtc
tctgctatggcctcactgtcagtggatgttgaacagtctttttctcaggaagacagcaga
gctgctggcgagcccatggaagaagagccagccttgtga
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integrated database retrieval system
