Trachemys scripta elegans (red-eared slider): 117872392
Help
Entry
117872392 CDS
T07347
Symbol
THRB
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117872392 (THRB)
04081 Hormone signaling
117872392 (THRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117872392 (THRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tst03310
]
117872392 (THRB)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117872392 (THRB)
Nuclear receptors [BR:
tst03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117872392 (THRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117872392
NCBI-ProteinID:
XP_034616675
LinkDB
All DBs
Position
2:complement(67781416..68041470)
Genome browser
AA seq
405 aa
AA seq
DB search
MTEIEAVLPAASLQKSKVILVKKKNENDYLSITPSSMSGYIPSYLDKDELCVVCGDKATG
YHYRCITCEGCKGFFRRTIQKNLHPTYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMAT
DLVLDDSKRLAKRKLIEENREKRRREELQKTIGHRPEPTDEEWELIKIVTEAHVATNAQG
SHWKQKRKFLPEDIGQAPMVNAPESGKVDLEAFSQFTKIITPAITRVVDFAKKLPMFCEL
PCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDL
GMSLSSFNLDDTEVALLQAVLLMSSDRPGLLSVERIEKCQEGFLLAFEHYINYRKHHVAH
FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatagaagcagtattgccagccgccagccttcaaaaatcaaaggtgatattg
gtgaaaaagaagaatgagaatgattacttatccataactcccagcagtatgtcaggatac
atacccagttacttagacaaggacgagctatgtgtagtatgtggtgacaaagccaccggg
tatcattatcgctgcatcacttgtgaaggatgcaagggattttttagaagaaccattcag
aaaaatctccatccaacctattcctgtaaatatgaaggaaaatgtgtgatagacaaagta
acaagaaaccagtgtcaagaatgtcgcttcaaaaaatgcatctatgttggcatggcaaca
gatttggtgctggatgacagcaagcggttagcaaaaaggaaactgatagaagaaaaccga
gagaagagacgtcgggaggagctacaaaaaacaattgggcacagacccgagccaacagac
gaggaatgggagctgatcaaaattgtcactgaagcacatgtggccaccaatgcacaagga
agtcactggaaacaaaaaaggaaatttctgccagaagatattgggcaagcaccaatggtt
aatgccccagaaagtgggaaagtggatttagaagccttcagccagtttacaaaaattatc
acaccagcaattacaagagtggtggattttgccaaaaagttgcctatgttttgtgagctg
ccatgtgaagaccagataatccttttgaaaggttgctgtatggagattatgtccctccga
gcagcagtgcgctacgaccccgagagtgagactttaacactaaatggggagatggcagtg
acaaggggtcagctgaaaaacgggggtctcggcgtagtgtctgatgccatcttcgacctg
ggcatgtcgctgtcctcatttaacctggatgacacggaggtcgccctgctccaggctgtg
ctgctcatgtcatcagatcgcccaggtctcctcagtgttgagaggatagaaaaatgtcaa
gaaggtttcctcctggcctttgaacactacattaattacagaaaacatcacgttgcacac
ttttggccaaaactgctgatgaaagtgacagatctacgaatgattggagcctgccacgcc
agccgcttcctgcacatgaaggtggaatgccccacggaactctttccccctttgttcttg
gaagtgtttgaggattag
DBGET
integrated database retrieval system
