Trachemys scripta elegans (red-eared slider): 117872393
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Entry
117872393 CDS
T07347
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117872393 (TOP2B)
03036 Chromosome and associated proteins [BR:
tst03036
]
117872393 (TOP2B)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
117872393 (TOP2B)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Topoisomerases
117872393 (TOP2B)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
117872393 (TOP2B)
Centrosome formation proteins
Centriole proteins
117872393 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
117872393
NCBI-ProteinID:
XP_034616686
LinkDB
All DBs
Position
2:complement(68670544..68784691)
Genome browser
AA seq
1619 aa
AA seq
DB search
MAKSGGGGGGSGGLTWVTLFDNQNNASKKEESQNVSKNDSSKKMSVERVYQKKTQLEHIL
LRPDTYIGSVEPLTQLMWVYDEEVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTC
IKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNG
YGAKLCNIFSTKFTVETACKEYKHSFKQTWLNNMMKTSDPKIKHFEGDDFTCITFQPDLS
KFKMEKLDKDIMALMTRRAYDLAGSCKGVKIMFNGKKLPVNGFRSYVDLYVKDKLDETGV
ALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQIVGKLIEVVKKK
NKAGVSVKPFQVKNHIWVFVNCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASN
CGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSLDCTLILTEGDS
AKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYED
PESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKSK
QELAFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPE
DDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELI
LFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQAL
MMTIVNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDN
LLKFLYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRRMLDGLD
PHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPML
NGTEKTPALISDYKEYHTDATVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFD
HMGCLKKYETVQDILKEFFDLRLNYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKIT
IENRSKRDLIQMLVQRGFESDPVKAWKEAQEKAAEEEETQNLNDDASSSSGSTSGPDFNY
ILNMSLWCLTKEKVEELIKQRDSKGRELTDLRRKSPSDLWKEDLAAFIEELDKVEAQERE
DILAGMVGKPIKGKVGKPKMKKLQLEETMPSPFGRRIVPQVTSAMKADASKKLLKKKKGD
LDSLAIKMEFDEEFGGTPAEGGGEDSLNTSVSVSKTPKPKREKKEPGTRVRRTPSSTKST
AKKVKKRNPWSDDESKSESDLEENEPVIIPRDSLLRRAAAERPKYTFDFSEEEDDADDDD
VNNNNDLDELKVKASPVINDREDEFVPSDSLDKDEYDFSPVKSKPSPDRKTSHDKKNQDF
GNLFSFPSYSQKTDDDATKLDSEEEDSAPVFSSSFTLKQTEKTQSKTVAAKKAKPASDIP
PKPKRSPKRKKMEIINSDSDSEFGIPKKTAPPKGKGRGSKKRKASGSENEGEYNPGKKTP
KSAPSKKSKKASFDQDSDVDIFQTDFASEPASKPRMGRARKEVKYFAESDEDDDFTMFN
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatccggaggaggtggcggtggcagcgggggactgacctgggtgactctattt
gataatcagaacaatgcttcaaaaaaagaagagtcacaaaatgttagtaaaaatgatagt
tcaaagaagatgtcagttgagagagtttatcagaaaaagactcaacttgagcatatcctc
ctccgtcctgatacgtacattggatcagtggaacctttaactcagttaatgtgggtttat
gatgaagaggttggaatgaattgcagagaagttacctttgtcccaggcttgtacaagatc
tttgatgaaattctcgtaaatgccgctgacaataaacagagggacaagaatatgacctgt
attaaaatttccattgatcctgaatcaaacattattagtatttggaataatgggaaagga
attccagttgtggaacacaaagtagaaaaagtgtatgttcctgctttaatctttggacag
ctgttaacatctagcaactatgacgatgatgagaaaaaagttacaggtggtcgtaatggt
tatggtgcaaaactttgtaatatattcagtacaaaatttacagttgaaactgcttgcaaa
gaatacaaacacagtttcaaacagacttggctgaacaatatgatgaagacttctgatccc
aagattaagcattttgaaggagatgacttcacatgcatcacattccaaccagatctttct
aaatttaagatggaaaagcttgacaaggatattatggccctcatgacaagaagagcttat
gatttggctgggtcatgcaaaggagtcaaaattatgtttaatgggaagaaactacctgta
aatggattccggagttacgtagatctttacgtaaaggacaagttggatgaaactggagtt
gcacttaaagttattcatgaacttgcgaatgaacgatgggatgtgtgtctcactttaagt
gaaaaagggtttcagcaaatcagttttgtaaatagcatagctaccacaaagggtggtagg
catgttgattatgtagtggatcagattgttggtaaattgattgaggtggtaaagaagaag
aacaaagctggagtttcagtgaaaccgtttcaggtgaagaatcatatatgggtttttgtg
aattgcctgattgaaaatccaacttttgattctcagacaaaggaaaacatgacccttcag
cctaaaagttttgggtccaagtgccagctatcagagaaatttttcaaagcagcctctaat
tgtggtatcgtagagagtattctgaactgggtcaaattcaaagcacagactcagctgaac
aaaaaatgttcatcagtgaagcacagtaaaatcaaaggcattccaaaactagatgatgct
aatgatgctggtggcaaacattctttggactgcacgttgattttaacagaaggagactct
gccaaatctttagctgtatctggcttaggggtcattggacgagacagatatggggtattc
ccactcaggggtaaaattctcaatgttcgggaagcttctcacaagcagattatggaaaat
gcagaaatcaataacattatcaaaatagttggtctgcagtacaagaagagctatgaagat
ccagaatctctaaaatccttgagatacggaaagattatgatcatgactgatcaggatcag
gatggatctcacataaaaggcttgttaatcaactttattcatcacaattggccatctctt
ttgaaacatggttttcttgaggaattcattactcccattgtaaaggcaagcaaaagtaag
caggaacttgccttctacagtatccctgaatttgatgagtggaagaaacatatggagaat
cataaagcatggaagataaaatactacaaaggtttgggtaccagcactgctaaagaagca
aaggaatactttgctgacatggagaggcatcggatcttattcagatatgctggtcctgaa
gatgatgctgccattacactggccttcagtaaaaagaaaattgatgaccgaaaagagtgg
ttaacaaacttcatggaagaccgaagacagcgtcggttacatggccttccagagcaattt
ctgtatggtacagcaacaaagcatttgacttacaatgacttcattaacaaggagttgatt
ctcttctcaaactcagacaatgagagatccattccatccctagttgatggttttaagcca
gggcagcgcaaagttttgttcacttgctttaagagaaacgataaacgtgaggttaaagtt
gcacagctggctggttctgttgctgaaatgtcagcctatcatcatggagagcaagcatta
atgatgactattgtcaacttggctcagaactttgttggaagtaacaatgttaatctactg
cagcctattggtcagtttggtaccaggcttcatggtgggaaggatgctgccagccctcgt
tatattttcacaatgttaagctctttagcacggctgctttttcctgcagtggatgacaac
ctgcttaagttcctttatgatgataaccagcgcgtagaaccagagtggtatattcccatc
attcccatggttttagtaaatggtgctgagggaattggtacaggatgggcttgtaaactt
cctaactatgataccagagagattgtgaacaatgtcagacgaatgttggatggcttggat
ccccatcctatgcttccaaactacaaaaactttaaaggaactatccaggaacttggtcag
aatcagtatgcagttagtggtgaaatatttgtagtggacaggaatacagtagagattaca
gagcttccagtgagaacgtggacccaggtatacaaagaacaagtgctagaacctatgttg
aatgggaccgaaaaaactccagcattaatttccgattacaaagagtaccacactgatgca
actgtgaaatttgttgtgaaaatgacagaagaaaaacttgctcaagcagaagctgctgga
ttgcacaaagtctttaaacttcaaacaagtcttacttgtaattctatggtgctatttgat
catatgggatgtctgaagaagtatgaaactgtgcaagatattttgaaggaattctttgat
ttacgattaaattactatagtttgcgcaaggagtggcttgtaggaatgttgggggcagaa
tctaccaagcttaacaatcaagctcgcttcattctagagaagatacaggggaaaattacc
atagagaatagatcaaagagagatttgattcaaatgttagtccagagaggttttgaatct
gacccagtgaaagcctggaaggaagcacaagaaaaggcagcagaagaggaagaaacacag
aatctgaatgatgatgcctcctcttcttcaggctctacctcaggccctgattttaactac
atcctaaacatgtctctatggtgtcttactaaggagaaagtagaagagctaattaaacag
agagattcgaaggggagagaactcactgacctcaggaggaagtctccttcagatctctgg
aaagaagatttagcagctttcattgaagagcttgataaagtagaagctcaagaaagagaa
gatattttggctggcatggttggcaaaccaataaagggtaaagttggtaaacccaagatg
aagaaacttcagttagaagagaccatgccatccccatttggtagaagaatagttccgcag
gttacatctgccatgaaagctgatgctagtaagaaattgctaaagaagaagaagggtgat
cttgattctctagcaataaaaatggaatttgatgaggaatttggtggaaccccagcagag
ggtggtggagaggactcactgaatacatctgtctcagtgtctaaaactcctaaacccaag
agggagaaaaaggagcctggtaccagggtgagaagaacaccatcttccacaaaatccact
gcaaaaaaagtgaagaaacgaaacccttggtcagatgatgaatccaagtctgaaagtgat
ttagaagaaaatgaacctgtgattattccaagggactctttgcttagaagagctgcagct
gaaagacccaagtatacttttgatttctcagaagaggaagatgatgctgatgacgatgat
gtcaacaataataatgatttagatgaactgaaagtaaaagcatctccggtcataaatgac
cgagaggatgagtttgttccatcagacagtttagataaagatgaatatgacttctctcca
gtcaaatcaaaaccttctccagatagaaaaacatctcacgacaagaagaatcaagatttt
ggaaacctgttctcatttccatcttattctcagaagacagatgatgatgcaacaaaatta
gacagtgaagaagaggattctgctccagttttctcatcttcttttaccctgaaacaaaca
gaaaaaactcaaagtaaaacagtagctgctaaaaaagcaaaaccagcttcagacataccc
cctaaacctaaaagatctcccaagcggaagaagatggaaattataaactctgattcagat
tcagaatttggcattccaaagaagactgcaccacccaaaggaaagggtagagggtccaag
aaaaggaaagcatctggttctgaaaatgaaggtgaatacaaccctgggaagaaaacaccc
aagtcagccccaagcaagaaatccaagaaagcctcctttgaccaggattctgatgtagac
atctttcagacagactttgcttctgaaccagcatctaagccacggatgggtcgggctaga
aaagaagtgaaatattttgcagagtctgatgaagatgatgattttactatgtttaattaa
DBGET
integrated database retrieval system
