Trachemys scripta elegans (red-eared slider): 117872536
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Entry
117872536 CDS
T07347
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03430
Mismatch repair
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117872536 (MLH1)
03460 Fanconi anemia pathway
117872536 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117872536 (MLH1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117872536 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
NDNF
Motif
Other DBs
NCBI-GeneID:
117872536
NCBI-ProteinID:
XP_034616979
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All DBs
Position
2:83680490..83719348
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AA seq
753 aa
AA seq
DB search
MALMAGVIRRLDEVVVNRIAAGEVIQRPANAIKEMLENCLDAKSTSIQVIVKEGGLKLIQ
IQDNGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTA
DAKCAYRASYCDGKLKAPPKPCAGNQGTQITVEDLFYNVTTRRKALKNPSEEYAKILEVV
GRYAIHNSGISFSVKKQGDTVADVRTLSNATTVDNIRSIFGNAVSRELIEVGCEDGKLAF
KMKGYITNANYSVKKCMFLLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLSLEIAP
QNVDVNVHPTKHEVHFLHEDSILESVQQHIESKLLGSNSSRMYFTQTLIPGVECSSTEVV
KSAASSSFTAKGTGDKVYAHQMVRTDSRDQKLDAFLQPVNKPLSTVHTALTLDGGTGLSD
GRSRQQDTEMEDLNDFDTMVAAQRDSVMTPEGQKESGRQTPETAPTRKRQWTGSDVEMEE
DDTRKGMTAACTPKRRIINLTSVLTLQEEISSQAHASLQEMLRDHSFVGCVSPQWALAQY
QTKLYLLNTTQLSQELFYQILLYDFANFGVLRLSEPAPLYDLAMLALENTESGWTEEDGP
KEGLAEYIVEFLKKKTEMLKDYFSLEIDEDGNLTGLPLLLDNYVPPLEGLPMFILRLATE
VNWDEEKECFESLSKECAMFYSIRKQYIVEESDLTSQQTEELGSGSSSWKWTVEHVIYKA
FRTHLLPPKHFTEDGNILQLANLPDLYKVFERC
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgatggcgggcgtgatccggcggctggacgaggtggtggtgaaccgcatcgcg
gccggcgaggtcatccagaggccggccaacgccatcaaggagatgctggagaactgtttg
gatgccaaatctaccagcatccaggtgattgttaaggagggaggtctgaaactcattcag
atccaagataatgggtgtggaatcaggaaagaagatttggatattgtgtgtgagagattc
actacaagcaaattgcaaaaatttgaagatctggctagtatttctacatatgggtttagg
ggagaggcattggctagcataagtcatgttgcccatgttactgtcacaactaaaactgct
gatgcaaagtgtgcatacagagcaagctattgcgatggaaaactgaaagcgcctcccaaa
ccttgtgctggaaaccaggggactcagatcacggttgaggatcttttctacaatgtaact
acaaggaggaaagccttaaaaaatccaagtgaagagtatgcaaaaatattagaagttgtt
ggcaggtatgccatccacaactcaggcatcagtttttcagttaaaaagcaaggtgatacg
gtggcagatgttagaaccctatcaaatgccacaacagtggacaatatcaggtccattttt
ggaaatgctgttagcagagaactgatagaagtgggctgtgaagatggaaagctggccttt
aaaatgaaaggctacataacaaatgcaaactactcagtgaagaaatgcatgtttttactc
ttcataaatcatcgactggtggagtcaactgctttgcggaaagctatagaaactgtatat
gctgcttatttgccgaaaagtacacatccattcctgtacttaagcctggaaatagcccct
cagaacgtagatgtgaatgtgcatcctacaaagcatgaagtccattttcttcatgaagac
agtatcctagagagtgtgcagcaacatatagagagcaaattactgggctctaactcttca
aggatgtacttcacccagactttgatcccaggagttgaatgctcttccactgaggttgtt
aaatcagcagcaagctcctctttcacagctaaaggaacaggtgataaagtctatgcccac
cagatggtccgcaccgattcccgagaccagaagctggatgctttccttcagcctgtaaac
aaacccttgagtacagtgcatacagcgctgaccctagacggtggtaccggactttctgat
ggcagatccagacagcaggatactgaaatggaagatctcaatgactttgatacaatggtt
gctgcacagagggattcagtgatgacaccagaggggcagaaggaaagtggaaggcagact
cctgaaacagcccctactagaaagagacagtggacaggctctgatgtggaaatggaggaa
gatgatactagaaagggaatgactgctgcctgtacccctaagagaaggattattaaccta
accagtgtgttgactctgcaagaggaaattagtagccaagcacatgcaagtcttcaggag
atgctacgtgatcactcgtttgttggttgtgttagtccacagtgggccctggcacaatac
cagacaaagctgtatcttctcaataccacacaactcagccaagaactcttctaccagatt
cttctttatgactttgcaaactttggagttctgaggttgtcagagccagctccactgtat
gatctagctatgctagccttggagaacactgaaagtggctggacagaagaagatggccca
aaggaaggacttgctgaatacattgttgagtttctaaaaaagaagactgaaatgctgaaa
gactatttctctcttgaaattgatgaggatggaaaccttactggattaccactcctgcta
gacaactatgttccaccattggagggactacctatgtttatccttcgcttagccacagag
gtaaactgggatgaagaaaaagaatgttttgaaagcctcagtaaagagtgtgccatgttt
tactccattagaaagcagtatatcgtggaggaatctgacttgactagccagcagactgaa
gagcttggatctggttcatcatcatggaaatggactgtggaacatgttatttacaaagct
ttcaggacccaccttttgcctcctaaacacttcacagaagatggcaacattttgcagctt
gctaatctgccagacctgtataaagtttttgagaggtgttga
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