Trachemys scripta elegans (red-eared slider): 117872608
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Entry
117872608 CDS
T07347
Symbol
GLI3
Name
(RefSeq) transcriptional activator GLI3 isoform X1
KO
K06230
zinc finger protein GLI3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117872608 (GLI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117872608 (GLI3)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117872608 (GLI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
DUF7565
Motif
Other DBs
NCBI-GeneID:
117872608
NCBI-ProteinID:
XP_034617142
LinkDB
All DBs
Position
2:complement(91300272..91559068)
Genome browser
AA seq
1575 aa
AA seq
DB search
MEAQSHSSATTQKKKVENSIVKCSTRTDVSEKAVASSTTSNEDESPGQTYHRERRNAITM
QPQGGQGLSKISEEPSTSSEERASLIKKEIHGSISHLSEPSVPYRGTVFAMDPRNGYMDP
HYHPPHLFPAFHPPVPIDARHHEGRYHYEPSPIPPLHVPSALSSSPTYSDLPFIRISPHR
NPAATSESPFSPPHPYINPYMDYIRSLHSSPSLSMISAARGLSPTDAPHAGVSPAEYYHQ
MALLAGQRSPYADIIPSAATAGAGALHMEYLHAMDSARFPSPRLSTRPSRKRTLSISPLS
DHSFDLQTMIRTSPNSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYPPTPVSLQQM
HQQIISRQQTLGSAFGHSPPLIHPAPTFPTQRPIPGIPSVLNPVQVSSGPSESTQQNKPT
SESAVSSTGDPMHNKRSKIKPDEDLPSPGAGNMQEQPEGMTLVKEEGDKDESKQEPEVVY
ETNCHWEGCSREFDTQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMR
RHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQN
RTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDIHPRPPPPRDPGS
HSQSRSPGQQTQGAIGEQKDLSNTTSKREECLQVKAVKSEKPMTSQPSPGGQSTCSSEQS
PISNYSNHGIELNLTSGGSVGDLSVIDETPIMDSTISTATTALGLQARRNMTGTKWMEQV
KLERLKQVNGVLPRLNPIPPSKAPTLPPLIGNGIQSSSSCSLGGSMTILPNRNEISSMDI
TVLNMLNRRDSSTSTISSAYLSSRRSSGISPCFSSRRSSDASQAEGRPQNMSVADSYDPI
STDASRRSSEVSQCDGLPSLLSLTPAQQYRLKAKYAAATGGPPPTPLPNMERMSLKTRMA
LLGDCRESGVSPLPPVNAPRRCSDGGANSYNRRHFLAHDVLGNGTRRASDPVRMVSDNLS
LPRVQRFNSLNSFNPPVLPPSMEKRNFILQNYTRSDGGLFRNTYSPCPPSISENVTMEAA
TMEADGGLNDEDLLPDDVVQYLNSQNQSMYDHLPNDVLDNNKVPHGSAIGNNNFHQAPSP
NSQQTSSEANKSDLPIQWNEVSSGSSDLSPSKMKCGPRSAIQQTRAFGLYNNMMVQQQNL
ERNGMGQQNGYQHLVENSSSYSLHQNMIISNNTTSNSFNMQANKAQPYGESITRQPMISG
AMDSSCGIVIQGQKLRNNSMLINKSQQNFGHPMVPGEQSVSMANGMQSRNTIEQEYLQNQ
PIGEGIHYQGVNQTNQMMLGQVSPTSQMSLCQGPQSSPPMSHNIGNQQSGLVVTKSYQPC
ANYGGNRRQNMLRNNLAQQQGFISDANQTYRVNGIKMEMQGQSQQFCSNMQNYSGQLYDQ
SMGFTQQAMKTGSFSISEANCLLQGTGIPNSSELLSPGANQVTSTVDSIDSNSLEGVQID
FDAIIDDEDHASLISGALSPSIIQNLSHNSSRLTTPRASLTFPAMPVSTTNMAIGDMSSL
LTSLAEESKFLAVMQ
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccagtcccatagctctgccacaacccagaagaaaaaagttgagaattccata
gtgaaatgctccactcgaacagatgtcagtgagaaagctgttgcctccagcacaacttcc
aatgaggatgaaagtcctggacagacctatcacagagagagaagaaacgcaatcacaatg
cagccacaaggtgggcaaggcctcagtaaaatcagtgaagagccttcaacatctagtgag
gaaagggcctcattaataaagaaggagatccatggatctatatcgcacctttctgagcct
tctgtaccttatcgtgggacggtttttgcaatggaccccaggaatggttacatggatcct
cattatcatccgcctcacctttttccagcattccaccctcctgtgccaattgatgcaaga
catcacgagggacgttaccattatgaaccatctcccattcctccactgcatgtgccttct
gccttatctagtagcccaacatattcagatcttccgttcattagaatttccccacacaga
aatccggctgcaacatcagaatctcccttcagccctcctcacccttacattaacccttac
atggactacatccgatcactgcacagtagcccgtctctgtccatgatctcggcagcccgt
ggactcagccctacagacgctccacacgctggagtcagtccagctgaatattaccatcag
atggctctattggcaggtcagcgcagcccatatgcagacattattccttcagctgctact
gcaggagctggcgcccttcatatggaataccttcacgccatggatagtgccaggtttccg
agtccaaggctgtcaactagaccaagccgaaagcgtacgctgtccatatcgcccctgtct
gatcatagctttgaccttcagaccatgatacggacatctccaaactccttggtcacaatt
ctcaataattcccgtagcagttcttccgctagtggttcctatggccatttatctgcaagt
gcaataagtcctgctctgagtttcacttaccctcccacaccagtatccctccagcaaatg
catcagcaaattataagtcgtcagcaaaccctaggttcggcctttggacacagccctcca
ctcatccatcctgccccaacttttcctacccagagacctatcccaggcatccctagtgtc
ctgaaccctgtccaagtcagctctggtccttccgagtccacgcagcagaataaacccaca
agtgaatctgcagtgagcagcaccggggatccaatgcacaacaagcgttccaagataaaa
ccagatgaggaccttcccagtccaggtgcaggaaacatgcaggaacagccagaaggaatg
acccttgtaaaagaggaaggggacaaagatgaaagcaagcaggagcccgaagtggtctat
gagacgaactgccattgggaaggctgttcacgagagtttgacacgcaggaacagctagtg
catcatataaacaatgatcatatacatggagagaagaaggagtttgtgtgccgatggctg
gattgttcccgggagcagaagccgttcaaagcccagtatatgttggtggtacacatgagg
agacacacaggggaaaagccacacaaatgcacttttgaaggttgtacaaaggcctactcc
agactagaaaacttgaaaacccacttgagatctcacactggagagaaaccatatgtgtgt
gagcatgagggctgcaacaaagcattctctaatgcctccgatcgagccaagcaccaaaac
aggactcattccaatgagaaaccatatgtttgcaagataccaggctgcacaaagcgctac
acagaccccagttctctccggaaacacgtgaagactgtgcatggccccgaggcacatgtc
accaagaagcagcgtggagatattcatccaaggcctccaccaccaagagacccaggcagc
cattctcaatccagatcaccaggccagcagactcagggtgcaattggcgagcaaaaggac
ctcagcaacactacctcaaagcgggaagaatgcctccaagtgaaagctgtcaagtcagaa
aaaccaatgacatctcagccaagccctggtggtcagtctacatgcagcagcgaacagtcc
cccatcagcaactattccaaccatgggatcgagcttaatctgaccagtggaggtagtgta
ggagacctcagtgtcattgatgaaaccccaatcatggactctaccatttccacagcaacc
acagcacttggcttacaggccagaaggaacatgacagggaccaaatggatggagcaagtc
aaattagaaaggttgaaacaagttaatggagtgcttccaagactgaatcccattccacct
tcaaaagccccaaccttgccacctctcataggaaatggtatccagtcaagcagcagctgc
agtttaggaggatccatgactattctacccaacagaaacgaaatttcaagtatggacatc
acagtgttaaacatgctgaacaggagggacagcagcaccagcacaattagttccgcctac
ttgagtagccgtaggtcctctggaatttcaccttgcttttccagtcggagatccagtgat
gcttcccaagctgagggaaggcctcagaacatgagtgtcgccgactcctatgaccccatc
tcgactgatgcctccaggcgatccagtgaagtgagtcagtgtgatggcctgccaagccta
ctcagcctcaccccagcccagcaatacaggctgaaagctaaatatgcagcagctactggt
ggacccccaccaactccactgcctaacatggagaggatgagcctcaaaacaaggatggca
ctgttgggtgattgcagggagtctggagtatctcctctgcctccagtaaatgctcctcgt
agatgtagtgatggtggggcaaatagttataacaggaggcattttctggctcatgatgtg
ctgggaaatgggacaaggagagccagtgatccagtaagaatggtttccgacaacctttct
ctgcctagagtccagcgattcaacagtcttaatagctttaaccctcctgttttgcctcca
tctatggaaaagcgaaactttattcttcagaactatacccgctctgatggcggcctgttc
cgtaacacctactccccatgtcctccgagtatcagtgagaatgttaccatggaggctgct
accatggaagcggatggtggtctaaatgatgaggatctcttgccagatgatgtggttcag
tatttgaattcccagaaccaaagcatgtatgaccatttgccaaacgatgtcctggacaat
aacaaagtgcctcacgggtcagcaatagggaataacaactttcaccaggccccttcacca
aacagtcaacagaccagctctgaagcaaacaaaagcgacctgccaatccagtggaatgaa
gtaagctcaggaagttctgacttgtctccttcaaaaatgaaatgtggtccacgctcagca
atccaacaaactcgagcttttggactatataacaatatgatggtccagcagcagaacctg
gagagaaatggtatgggccaacaaaatggctatcaacatcttgtggaaaacagcagctct
tacagtttacatcagaacatgattatcagcaacaacaccaccagtaactctttcaacatg
caggcaaataaggcacagccatatggtgaaagcatcaccagacaaccaatgatttctggg
gcaatggacagttcctgtggcatagtgattcaagggcagaagttgaggaacaacagcatg
ctaataaacaagagtcagcaaaactttggccatcccatggtgccaggtgagcaatctgtc
agtatggctaatgggatgcagagtagaaatacgatagaacaggaatacctgcagaatcag
ccaataggggaaggcattcattatcagggagtcaatcaaaccaatcaaatgatgttaggg
caggttagtcctacctcacaaatgagcctttgtcaagggccacagagttctccaccaatg
tctcacaacattggaaatcagcaatcaggtttggtggtgacaaagagttaccagccatgt
gccaactatggaggcaacagacggcaaaacatgctgagaaacaacctggcacaacagcaa
ggatttataagtgatgcaaaccagacatacagggtaaatggcattaagatggagatgcaa
ggtcaatcacaacagttctgctctaatatgcagaattactctggtcagttatatgaccaa
tccatgggctttactcagcaagctatgaaaacaggttctttctctatttcggaagctaac
tgcctgctgcaggggactggtattccaaattcgtctgagcttctttccccaggggctaac
caggtgacaagcacagttgacagcattgacagcaacagcctagaaggtgtgcagattgat
tttgatgctatcatagatgatgaggaccatgccagcttaatttcaggagccctgagtccg
agtatcattcagaatctctcacacaattcttcacgcctcaccactccccgagcgtctctt
acattcccagctatgcctgtgagcacaacaaacatggctattggggacatgagttctttg
ttgacctcacttgcagaagaaagcaagtttcttgctgttatgcaatag
DBGET
integrated database retrieval system
