Trachemys scripta elegans (red-eared slider): 117872664
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Entry
117872664 CDS
T07347
Symbol
RPRD1A
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117872664 (RPRD1A)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117872664 (RPRD1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
CCDC113_CCDC96_CC
UPF0242
Motif
Other DBs
NCBI-GeneID:
117872664
NCBI-ProteinID:
XP_034617251
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All DBs
Position
2:105684191..105750906
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AA seq
311 aa
AA seq
DB search
MSAFSEAALERKLSELSNSQQSVQTLSLWLIHHRKHSGLIVTVWERELRKAKPNRKLTFL
YLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSESDESCKKHLGRVLSIWEERAVYEND
VLEQLRQALYGDRKARKRTFEQIKVDENNCSAQSSPSDPPQTTDLIRALQELENAASGDA
AVHQRIASLPVEVQDVSLLDRITDKESGEQLSKMVDDACMVLADYNGRLAAEIDDRKQLT
RMLSDFLRCQKEVLAEKEHKLEEYKRKLARVSQVRKELRSRIQNLPDLSRLPNVTGSHVH
LPFAGDIYSDD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttctcggaggcggcgctggagcggaagctctcggagctcagtaactcccag
cagagcgtgcagacgctgagcctctggctcatccaccaccgcaagcactcggggctcatc
gtcaccgtctgggagcgggagctgcgcaaagcaaaaccaaataggaagttgacattccta
tacctggccaacgatgtcattcagaacagcaaaaggaaaggaccagaatttacaaaagac
tttgcaccagttatagttgaggcctttaagcatgtttcaagtgagtctgatgagagttgt
aagaagcaccttggccgagtgctctctatttgggaagaaagggctgtttatgaaaatgat
gtattggaacaacttaggcaagctttgtatggtgacagaaaggccaggaagcgtacattt
gaacagataaaagttgatgaaaataactgttcagcacaaagttctccaagtgaccctcca
cagactacagatctcattagagcattacaagaactagaaaatgcagcctctggggatgca
gcagttcatcagaggatagcttcattgcctgtagaggtccaagatgtgtccttactagac
agaataacagataaggaatctggagaacagctttccaagatggtagatgatgcttgtatg
gtactggcggattacaatggcaggttggcggctgaaatagatgatagaaaacaattaact
cgaatgttatcagactttctgcgatgtcaaaaagaagtccttgcagaaaaagagcataag
ttggaagaatacaagcgcaagttagccagagtatcccaggtgcgaaaagaactcaggtca
cgcatccagaaccttcctgatctgtctcgacttcccaatgtcacaggcagtcatgtgcac
ctaccatttgctggagacatttacagtgatgattga
DBGET
integrated database retrieval system
