Trachemys scripta elegans (red-eared slider): 117872700
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Entry
117872700 CDS
T07347
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117872700 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117872700 (TRIP13)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
117872700 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_14
AAA_18
AAA_24
IstB_IS21
AAA_5
AAA_28
NPHP3_N
ATPase_2
RuvB_N
Cytidylate_kin
TsaE
AAA_25
NACHT
AAA_33
AAA_17
RNA_helicase
DUF815
ABC_tran
AAA_30
AAA_11
bpMoxR
TIP49
AAA_7
ATPase
PduV-EutP
Mg_chelatase
Zot
Rad17
AAA_19
SLFN-g3_helicase
PhoH
NB-ARC
SPC25
DUF6707
AAA_3
nSTAND1
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
117872700
NCBI-ProteinID:
XP_034617319
LinkDB
All DBs
Position
2:112046423..112088312
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AA seq
435 aa
AA seq
DB search
MNKMDEAAGDLKQALPNVCDSVQIHVEVHQKSNSTSKKEDIRLSVLKLLNRHNIVFGDYT
WTEFDDGFLNNNVQSVSIVDTELKLKERQPINLSKCNLSIHIFHLNDEGPSTENLEEENE
NIVAANHWVLPTVEFHGLWESLVYDTEVKSHLLDYVMTTLLFSDKNVDSNLISWNRVVLL
HGPPGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQ
ELIDDKDALVFVLIDEVESLTAARSAFRAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILT
TSNITEKIDTAFVDRADIKQYIGPPSAAAVFRIYFSCLEELMKRQIIYPQQQLLTLRELE
MIGYVENNVSRLSLVLKEIARKSEGLSGRVLRKLPFLAHALYIQCPNVTMAVFLQALSLV
VDKQFEERKKLADCF
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatggatgaggcagctggtgatttaaaacaggcacttccaaatgtgtgtgat
tctgtgcagatacatgtagaagttcatcagaaatcaaacagcacctcaaagaaagaagat
atcaggctgagtgtcttaaagctgctaaacagacataacatcgtttttggtgattacaca
tggactgagtttgatgatggttttctgaacaacaatgtgcagtctgtgtcaattgtggac
acagagctaaaactgaaagaaagacagcccattaacctgagcaaatgcaatctctcgatt
catatttttcatctaaatgatgaaggaccaagcactgaaaatctagaggaagagaatgag
aatattgttgcagccaaccactgggtgctgcctacagttgaattccatggtctttgggag
agccttgtctatgacactgaagtaaaatcgcatctacttgactatgtgatgacaacttta
ctgttttctgacaaaaatgttgacagcaacctgatatcctggaacagagttgtcttgctg
catggtcctccaggaactggtaaaacttcactctgcaaagcattggctcagaagctgacc
attagactttcatacaggtacagatatggacagttaattgagataaacagtcatagcctc
ttctctaagtggttttctgagagtggcaaacttgtaaccaagatgttccagaagattcaa
gagttaattgacgataaagatgctcttgtatttgtactgattgatgaggttgaaagtctc
acagcagctcgtagtgctttccgagcaggcacagagccttcagatgctatccgtgtggtg
aatgctgtattgacacaaatagatcaaattaaaaggtatcccaatgttgtaatcttgact
acttcaaatattacagagaaaattgacacagcctttgtagatagggctgatataaagcaa
tatattggacctccatctgctgcagcagtattcagaatatatttttcttgcttggaagaa
ctgatgaagcgtcagataatatatcctcaacagcagctgctgacactcagagagctagag
atgattggttatgtagaaaataacgtgtcacggctgagtcttgtattaaaagaaattgca
aggaaaagtgaaggacttagtggccgtgtcctgaggaaacttccttttctagcacatgca
ctttatattcaatgtcctaacgttacaatggcagtgtttcttcaggctctttcacttgta
gtggacaaacaatttgaagaaagaaagaaacttgcagactgcttttga
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