Trachemys scripta elegans (red-eared slider): 117872729
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Entry
117872729 CDS
T07347
Symbol
IRX2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117872729 (IRX2)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117872729 (IRX2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
BUD22
Motif
Other DBs
NCBI-GeneID:
117872729
NCBI-ProteinID:
XP_034617358
LinkDB
All DBs
Position
2:117708195..117713427
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AA seq
465 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPTYGASALAAPRSEELARSSSGSAFSPYPGSAAFTAQAAA
TGFTSPLQYSTDPATGFPSYMGSPYDAHTTGMTGAISYHPYGSPAYPYQLNDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAP
RNKSEDEDEDEGDGARSKEESSDKVQESNETSAEDEGISLQVDSLTDHSCSAESDGEKLS
CRVGDTLCESGSDCKDKYEDIEDDEDEDDEAERDLPAKPATSSPLTGVEAPLLNHPHEDA
SRNSNKTTLDNRISPSSETQAIKPKLWSLAEIATSDLKNQNMGQSCQPPALSSVTPSSTS
HSSAYSPSSLLGRHIYYTSPFYTNYTNYGNFNALQSQGILRYNSAAMASNEGLSQTVLNT
SSVHKQSSDSLKTITNQLEQHYRPSSYESKKDPTDVCTVGVQPYL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagccccccggctcgctggctctgtactcctgc
ccgacgtacggggcgtcggctctggcggcccccaggagcgaagagctggccaggtcttcg
tcgggctcggcgttcagcccttacccgggatcggcagctttcacagcacaggcggcggcc
acaggcttcaccagcccgctccagtactccacagaccccgccacgggattcccctcctac
atgggctctccttacgatgctcatacgacggggatgaccggggccatcagttaccatccg
tatggcagtcctgcttacccttaccagctgaatgatcccgcttacaggaaaaacgccacc
cgagatgccacagccaccctgaaggcctggctgaatgagcacaggaagaacccctacccc
accaagggcgagaagattatgctggctatcatcaccaagatgaccctcacccaggtctcc
acctggttcgccaacgccaggaggaggctcaagaaggagaataagatgacttgggctccc
cggaacaaaagcgaagatgaagatgaagacgaaggggatggggcaagaagtaaggaggaa
agttcggacaaggtgcaggaaagcaatgaaacttcagcagaggacgaagggatcagcttg
caggttgactcgctcaccgatcactcctgctccgcggagtcggatggggagaagttatcc
tgccgagtaggggacacgctctgcgagtccggatcagactgcaaggacaaatacgaggac
atcgaggacgacgaggatgaagatgatgaagcagagagagaccttcccgctaagcctgcg
acttcctcccccctcaccggagtggaagctcccctccttaatcacccccacgaggacgct
tcaaggaactccaataaaactactttggacaacaggatttcccccagttccgagacacag
gccattaagcccaagctctggtctctagctgaaatagccacttcggaccttaaaaatcag
aacatgggccaaagctgtcagccaccggctttatcttcagtaaccccctcttctacttcg
cacagctctgcctactctccctcttctctcttaggaaggcacatttattacacttcacct
ttttataccaattatacaaactatgggaactttaacgcactccagagccaggggatcctg
agatataactccgcagcaatggcttcgaacgagggactaagtcaaactgtactaaataca
agctctgttcacaaacagagcagtgactctttgaaaacgatcactaaccagctagaacaa
cattacaggccctctagttatgagtctaagaaagatcccactgacgtctgcacagtagga
gtacaaccatacctatag
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