Trachemys scripta elegans (red-eared slider): 117872823
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Entry
117872823 CDS
T07347
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117872823 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117872823 (USP39)
Spliceosome [BR:
tst03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117872823 (USP39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
117872823
NCBI-ProteinID:
XP_034617512
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All DBs
Position
2:complement(141058121..141087456)
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AA seq
561 aa
AA seq
DB search
MRSSGWTRPGMSGRVKRERESRPSPRSSASGRVKREPAGSRGSSRGKREAEPERVRVKRE
PEDGPPRAKREREAEEEPESEPEPTVRYGRFDPEDRRSRHCPYLDTINRSVLDFDFEKLC
SISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDS
SLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALS
NVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVV
LCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPD
LPAEEKEQLLQNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNG
ITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYL
SEEVQAVHKNTTYDLIANIVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITL
SEAYIQIWKRRDEDETNQQGA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtagtggctggacgcggcccgggatgtccggccgggtgaagcgggagcgggag
tcccggccgtccccgcggagctcggcctcgggccgggtgaagcgggagccggcggggtcg
cgcggctcctctcgagggaagcgcgaggcggagcccgagcgggtccgggtgaagcgcgag
cccgaggacgggccgccccgggccaagcgggagcgcgaggccgaggaggagccggagtcg
gagccggagccgacagtgagatatggccgatttgatcccgaggaccggcgcagcagacac
tgcccatacctggacactattaacaggagtgttctggattttgactttgagaagctgtgc
tccatctcactctcgcatataaacgtctatgcttgcctggtgtgtgggaagtacttccag
ggccgtgggttgaagtctcatgcttacattcacagcgtacagttcagccatcacgtcttt
ctgaacctccacaccctcaagttctactgtctgccagacaactacgagatcattgactcc
tcgctggaggacatcacttatgtgttgaagcccactttcaccaagcagcaaatcgccaat
ttggacaaacaagccaaactttcgcgggcatatgatggcaccacttacctgcctggcatt
gtgggactgaacaacatcaaggccaatgactatgccaatgcagtactccaggccctgtct
aacgtcccacctctgcggaactacttcctggaggaggagaactacaagaacatcaagcgc
ccaccgggggacattatgtttctgctcgttcagaggtttggagagctgatgaggaagctg
tggaacccccgaaatttcaaggctcacgtctctccccatgaaatgctgcaggccgtggtc
ctgtgcagtaagaagaccttccagattaccaagcaaggtgatggcgttgacttcctctcc
tggtttctaaatgccttgcactctgctcttggcgggacaaagaagaagaaaaagaccatt
gtgaccgacgtgttccaaggctccatgcggatctttaccaaaaagcttccacaccctgac
ctgccagcagaggagaaggagcagctgctgcaaaatgatgagtaccaggagacaatggtg
gaatccaccttcatgtacctgaccctcgacctccccactgccccgctgtacaaggacgag
aaggagcagctgatcatcccccaggtgccgctcttcaacatcctggccaagttcaacggc
atcactgagaaggagtataaaacctacaaggagaattttctcaagcgcttccagctgacc
aagctgcctccctacctcatcttctgcatcaagcggttcaccaagaacaacttctttgtg
gagaagaaccccaccatcgtcaacttccccatcacgaacgtggatctccgggagtacctg
tccgaggaagtgcaggccgtgcacaagaacaccacctacgacctcatcgccaacatcgtg
catgatgggaaacccaccgagggctcctacagaattcacgtgctgcatcatggcacgggc
aagtggtatgagctgcaagacttacaggtgaccgatatcctgccccagatgataacgctc
tcagaggcctatatccagatctggaagaggcgggatgaggatgagaccaaccagcagggg
gcatga
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integrated database retrieval system
