Trachemys scripta elegans (red-eared slider): 117872857
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Entry
117872857 CDS
T07347
Symbol
CIAO1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1
KO
K24730
cytosolic iron-sulfur protein assembly protein CIAO1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117872857 (CIAO1)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117872857 (CIAO1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117872857 (CIAO1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117872857 (CIAO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
PROPPIN
WD40_RFWD3
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
eIF2A
Beta-prop_HPS5
RMC1_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
117872857
NCBI-ProteinID:
XP_034617559
LinkDB
All DBs
Position
2:complement(142349263..142359058)
Genome browser
AA seq
339 aa
AA seq
DB search
MKDSLSLLARIPAHPDSRCWFLAWDPSGTLLASCGGDRSIRIWGKEGDGWVCKSVLGEGH
QRTIRKVAWSPCGSYLASASFDATTCIWKKSQDEFECVTTLEGHENEVKSVSWAPSGSLL
ATCSRDKSVWVWEVDEEDEYECVSVLNAHTQDVKHVVWHPNQELLASASYDDTVKLYREE
EDDWVCCATLEGHESTVWSLAFDQSGERLASCSDDKTVRIWHQYKPGNEQGVVCSGADPS
WKCICTLSGFHTRTIYDVAWCRLTGALATACGDDAIRIFEEEPLSSPQQPTFALTAHMPR
AHSQDVNCVAWNPKEPGLLASCSDDGEMAFWKYQRPEVC
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactcgctgtcgctgctcgcccggatcccagcccaccctgactctcgctgctgg
ttcctggcctgggacccctctgggaccctgctggcctcctgcgggggagaccgcagcatc
cgcatctggggcaaggagggggatggctgggtgtgcaagtcggtgctgggtgaggggcac
cagaggaccatccggaaggtagcctggtccccgtgtgggagctacctggcttcagccagc
tttgatgccaccacctgcatttggaagaagagccaggatgagtttgagtgtgtgaccacc
ctggagggacatgaaaacgaggtgaagtccgtatcctgggccccatccggcagcctcctg
gccacctgcagccgagacaagagcgtctgggtctgggaagtggacgaagaggacgaatac
gagtgtgtgagtgtcctgaacgcccacacgcaggatgtcaagcacgtggtctggcatccc
aaccaggagctgctggcatcagccagctatgacgacacggtgaagctgtaccgcgaagag
gaggatgactgggtgtgctgtgccacgctggagggacatgagtccacggtgtggagcctt
gccttcgaccagagtggggagcgcctggcctcctgcagcgacgacaagaccgtgcgcatc
tggcaccagtacaaaccaggcaatgagcaaggggtggtctgcagcggcgctgaccccagc
tggaaatgcatctgcaccctgtctggcttccacaccaggaccatttacgatgtggcatgg
tgtcgcctgacgggagcattggctacagcctgtggagatgatgctatccgcatatttgag
gaagagccgctgtcgagtccccagcagcccaccttcgcgctgaccgcccacatgcccagg
gctcactcccaggacgtgaactgtgtggcctggaatcccaaggagccggggctgctggct
tcatgcagcgatgatggagaaatggcattttggaagtatcagcggccagaggtttgctga
DBGET
integrated database retrieval system
