Trachemys scripta elegans (red-eared slider): 117872907
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Entry
117872907 CDS
T07347
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117872907 (TIA1)
03041 Spliceosome [BR:
tst03041
]
117872907 (TIA1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117872907 (TIA1)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117872907 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
117872907
NCBI-ProteinID:
XP_034617645
LinkDB
All DBs
Position
2:145203772..145227059
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AA seq
384 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMINPIQQNQIG
YPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAAWMGANYGVP
PPQGQNGSVLTNQTGYRMAGFETQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcccaagaccctatatgtagggaacctgtcaagagatgtgactgag
gcactaatcctccagctgttcagccagattggaccatgcaaaaactgcaaaatgatcatg
gatacagctggaaatgatccatactgttttgtggagttttatgaacatcgtcacgcagct
gcagcattagctgctatgaatggacggaagataatgggtaaggaggtcaaagtgaactgg
gcaacaacccccagcagccagaagaaagataccagcagtagtaccgttgtcagcacactg
cgttcacaagaccatttccatgtctttgttggagacctcagtccagaaattacaactgaa
gatataaaagcagcttttgcaccgttcggaagaatatcagatgcacgagtggttaaagat
atggcaacagggaaatctaaaggatatggctttgtttccttcttcaataaatgggatgca
gaaaatgctattcagcagatgggtggacagtggcttggtggaagacaaatcagaactaac
tgggcaacacgaaaacctccagctccaaagagtacatatgaatcaaacaccaagcagctg
tcttatgatgatgttgtaaatcagtcgagcccaagcaactgtactgtatattgtggtggt
gttacttcaggactaacagaacagctaatgcgccagaccttttctccatttgggcaaata
atggaaattcgagtcttcccagataaagggtactcttttatacggttcaattctcatgaa
agtgctgcacatgcaattgtttctgtcaatggaactactatagaagggcatgttgtgaag
tgctattggggcaaagaaacaccagatatgatcaatccaatccagcagaatcaaattgga
tatccacaggcttatggccagtggggccagtggtatggaaatgcacagcaaattggtcag
tacatgcctaatggttggcaagtccctgcatatggaatgtatggacaggcatggaatcag
cagggatttaatcagacacagtcttctgccgcatggatgggtgcaaattacggagttcca
ccacctcaggggcagaatggaagtgtgttaactaatcaaactggatatcgcatggcaggt
ttcgaaactcagtga
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