Trachemys scripta elegans (red-eared slider): 117872948
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Entry
117872948 CDS
T07347
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117872948 (NEFM)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117872948 (NEFM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
117872948
NCBI-ProteinID:
XP_034617723
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All DBs
Position
2:complement(149902483..149908121)
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AA seq
841 aa
AA seq
DB search
MSYTLDTLGNPSYRRVTESRATYSRASASPSSGFRSQSWSRGSPSTVSSPYKRSALGAQR
VSYGSTVLSSSESLDLSQSSLLNGAGDFKLSRSSEKEQLQGLNDRFAGYIEKVHYLEQQN
KEIEAEIAALRQKQAGRSQLGDAYEQELRELRCALEQVNHEKAQLQLDSEHVEEDIQRIK
ERFEEEARLRDETEATIRALRKDMEEASMVKVELDKKVQSLQDEVAFLRGNHEEEVAELL
AQIQASHITVERKDYMKTDITSALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEAAEHN
KEAIRTAKEEIAEYRRQLQSKSVELESVRGTKESLERQLNDIEERHNNDLTTYQDTIHQL
ENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSAFSGSITGPTFTH
RQPMVTISSSKIQKSKAEPPKLKVQHKFVEEIIEETKVEDEKSEMDDVLVAIAEELATSA
RQEEQKKEEEAEGEEEEAREEEIVAEKKAPEKAAAPKAEEEEKEEEEEEEKGEEEEEEAA
KSDEAEEGGSEKEEAEEKSEKEEGEEAEQEEEEEGEAEAEGEEAEAETKKEKEPEGKSKK
EAEEAAVEEKVEKVKVSLAKSPPKSPAAEEAEEEQKEAGEEAEGESEEQKMEKESKEEET
KEEKPGSPEKPGSPEKPGSPVKEEKAVVKETISVTKVTKVSAEKESKTKDGSSEGEESDQ
ASKGSMKEDIAVNGEVDEKEEEKSKEKEIEEEDKGVVTNGLDVSPSEEKKGKSEEKVVVT
KKVEKITGDDGDSTTKYITKSVTVTQKVEEHEESFEEKKMSTKKVEKVTSHAVIKQVKDS
D
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaccctggacacgctcggcaacccctcctaccggagggtgaccgagagccgg
gccacctacagccgggccagcgcctccccttccagcggcttcaggtcgcagtcctggtcc
cggggctccccgagcaccgtctcctccccgtacaagcgcagcgccctgggcgcgcagcgg
gtgtcctatggctccaccgtgctgagctcctccgagagcctggacctcagccagtcctcc
ctgctcaacggggccggggacttcaagctgagccgctctagcgagaaggagcagctgcag
gggctgaacgaccgcttcgccggctatatcgagaaggtgcactacctggagcagcagaac
aaggagatcgaggcggagatcgccgccctgcgccagaagcaagccggccgctcgcagctg
ggcgacgcctacgagcaggaactgcgcgagctgcgctgcgccctggaacaggtgaaccac
gagaaggcgcagctccagctggactcggagcacgtggaggaggacatccagcgcatcaag
gagcgcttcgaggaggaggcccggctgcgcgatgagaccgaagccaccatccgcgccctg
cgcaaggacatggaggaggcctccatggtcaaggtggagctggacaagaaggtgcagtcg
ctgcaggacgaggtggctttcctgcggggcaaccacgaggaagaggtggccgagctccta
gcccagatccaggcgtcccacatcacggtggagaggaaggactacatgaagaccgacatc
acctccgccctcaaggagatccgcagccagctggagtgccactccgaccagaacatgcac
caagccgaggagtggttcaagtgtcgctatgccaagctcaccgaggcggcggagcacaac
aaagaggccatccgcacggccaaggaagagatcgccgagtacaggaggcagctgcagtcc
aagagcgtggagctggagtcggtgaggggcaccaaggagtccttggagaggcagctgaac
gacatcgaggagcgccacaacaacgatctcacgacctaccaggacacgattcatcagttg
gaaaacgagctgaggggtacaaaatgggaaatggcacgtcatttgagggaataccaggat
ctcctcaatgtcaagatggcgctggatattgaaattgctgcatacaggaaactactggag
ggtgaagagacaagattcagtgccttctcgggaagcattactggtcccacatttacacac
aggcaacccatggtcacaatatcatctagtaaaatacagaaatcaaaagctgagccgcca
aagctaaaggtccagcacaaatttgtagaagaaatcattgaagagacaaaggtggaggat
gaaaaatctgaaatggatgatgtcctggtagctattgcagaggaattggcaaccagtgcc
aggcaggaagaacagaagaaggaagaagaagcagaaggggaagaggaagaagccagggaa
gaggaaattgtagctgaaaagaaagctccagagaaagcagctgcacccaaagctgaagaa
gaagaaaaagaagaagaagaagaagaagagaagggagaggaggaggaggaggaggctgca
aaatctgatgaagcagaagaaggaggttctgaaaaagaagaagcagaggaaaagagtgaa
aaggaagagggagaggaggctgagcaggaagaagaagaagaaggtgaggccgaagctgag
ggagaagaagctgaggctgagactaagaaagaaaaggaacctgaagggaagagcaagaaa
gaggctgaagaggctgcagtggaagagaaggtggaaaaagtaaaagtgtctttagcaaaa
tctccacctaaatctcctgcagcagaagaggctgaggaagaacagaaggaagcaggagaa
gaagctgaaggagaaagtgaagaacagaaaatggagaaggaaagtaaagaggaggaaaca
aaggaggagaagccaggatccccagagaagccaggatccccagagaagccaggatcccca
gtgaaagaagaaaaggctgtggtgaaagagaccatctcggtcacaaaggtaacaaaagtc
agtgcagagaaagagtccaaaacaaaggatgggagcagtgaaggagaggaaagtgaccag
gcctccaagggatccatgaaagaagacattgcagtgaacggggaggtggatgagaaggag
gaggagaaatccaaagaaaaagaaattgaggaggaagacaagggtgtggtcaccaatggc
ctggatgtgagcccatctgaagagaagaaagggaagagcgaagaaaaagttgtggtaacc
aaaaaggtggagaaaatcactggcgacgatggggacagtacaaccaaatacatcaccaag
tctgtgacagtcacccaaaaggtagaggagcacgaggaaagttttgaagagaaaaagatg
tccaccaagaaggtcgagaaagtcacttctcatgctgtaataaaacaagtaaaagacagt
gactaa
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