Trachemys scripta elegans (red-eared slider): 117873008
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Entry
117873008 CDS
T07347
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117873008 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117873008 (RAB11FIP1)
Membrane trafficking [BR:
tst04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117873008 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
117873008
NCBI-ProteinID:
XP_034617850
LinkDB
All DBs
Position
2:complement(155039296..155061250)
Genome browser
AA seq
1441 aa
AA seq
DB search
MSLSDSPPRWAPTHVQVTVLRARGLRPKAKGAGGGSDAYALMALGKEKFATSVSERCLGS
PVWREEATFELPPRRPGHGGEPALQLTVLHRALLGLDKFLGRAEIRLAELQEEGGRRSTR
WYTLHSKPGKKEKERGEIEVDIQFMRSNMTASMFDLSMKDKSRSPFGKLKGKLKGKRANG
LPDTASAIIPSITHSPADSEEESPEKEKKKSKIKTLFSKPGLQKTSLSQSMSVLPGFQPA
TEKVRLKPGDFQAKWGEDDDDESFPPNSEKAFGNKAEDNSLHVPVLMAHKRTASADNKQL
NEITSSNTKKEGLSLFSGLKSKNDPTPRSNVCINGNHVYRKESETKKETMSKDNTPSSSP
QTFRKNQPSESEENLSSKYTKEHEKTGRMSPSRGLSGSHSLESFKSMTLPSYKLLSGGDL
LGNSASLSLETEKEETKEDKKQENKKSALLSLVTGRKEVVKNNDVENMSDMTLKEREAKL
LEEKKNEKEVKPVEIPKDYNQESTPKNSNTADIPRNKKSHNPFDESLMEEEQKPDKSAAS
ARTIQTKAVKPRLGVSSEDETEATLPTSEPDSLSAFLSAHHSSNDNNPFTSKLGQKIKAR
DSSSPLPPSLISGQRSNDNAFISDWEQESKAQDSESFTSPLLYFPHPPAALGHVSSPLLS
THLSIDNNPFVSKLGQESKVQDFKSFTSPPSFSLPSAVSSKSYCSFAINFADSEHPAFVS
SEESQNESLTNDTNTVSNSLGSLSESSPLPVYERVGQTPKKQCDAKEVQMVSPDKKNNSG
VKKSVTFHLDELEYTDSSRNHAEALDREQRERWHPDPCEEMFTTDPTITEKREGFASVLG
MECYRSSKLCDESSSVQNSESTVQDDIEASSTSAETWMKDGKELTSLSKSNYSLSPGNAV
IQPSSAESKLNEEQELYSGKKSKHSLNMEEFGLALQSKVTHAIKSDSSVQVEPPKPTPRV
HTLLPKDPNMSEDVSELNPLFAKPKPAPRIAKPKPAPRNAKPKPTPRNAVKLDKCAPVSL
TGRLKDEELLTPSDSTMSGSGFVFHRENPMNPHENPAGDSLLKTATRSTTHHLDRDDSNN
GPLKHKTYGHDDSLFDSGTDLKSAIPVTGDQSLTHVGLPVIPEVGSDDELLDSSQKNNEM
TAIYKSFPNTENQCIDSLSVTEVEKLSSGMSSTDRASILLQKGEGGPEDTFKSSKSSKLN
SIVDIHSASSKTSESGLDILSYPSEHGCVVEEQELKESSSIKESRKSDFFESSEKSVSFT
SLSSSSQLSLSSSSPQTGSCDSSRAESVKKPPAESFNHKVENAGKKKVLRAWVSPSETLP
NQTQQSGGSVSVKHRPHPVKPMNTTANKSHTKNLTTTTKMDENWTESNRKKYDPSEPAYA
YAQLTHDELIQLVLRQKDTITKRDLQVRELENYIDNLLVRVMEETPNILRAPSPKNKAGR
M
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtcggactctccgccgcgctgggcccccacccatgtgcaggtaacggtgctg
cgggcccgggggctgcggcccaaggccaagggggccggcggcggcagcgacgcctacgcg
ctgatggcgctgggcaaggagaagttcgccacctcggtgtcggagcgctgcctgggctcg
cccgtctggcgggaggaggccaccttcgagctgcccccccgccggcccggccacggcggc
gagccggccctgcagctcaccgtgctccaccgcgccctgctcggcctcgacaagttcctg
gggcgggccgagatccgcctggccgagctgcaggaggagggcggccgccgcagcacccgg
tggtatacacttcactccaaacctggcaagaaggaaaaagagagaggagagattgaggtg
gatattcagttcatgaggagcaacatgacagccagcatgtttgatttatccatgaaagac
aagtcccggtctccatttggcaagctgaaaggcaaactcaaaggaaagcgggccaatgga
ctgcctgacacggcatccgccatcattcccagcataactcactcgccagcggatagcgaa
gaggaaagccctgagaaagaaaagaaaaaatccaagatcaaaaccctgttttctaaacct
ggtttgcagaaaacctccctctcccagtccatgtcagttttacctggttttcagccagcg
acggagaaagttaggcttaaacctggtgactttcaggcaaagtggggggaagatgatgat
gatgagtcctttcctccaaattcagaaaaggcctttggaaacaaagctgaagataactca
cttcatgttcctgtactcatggctcataagagaacagcaagtgcagacaataagcaacta
aacgaaataacctccagcaacaccaagaaagaaggactctccttattcagtggccttaaa
tccaaaaatgatcccacaccccgatccaacgtgtgtatcaatggcaatcatgtttatcgg
aaggaaagtgaaacaaaaaaggaaaccatgtcaaaggacaacactccttcctcttcccct
caaacattcaggaaaaaccagccctctgaatcagaagaaaacctgtcttcaaaatacact
aaggaacatgaaaagacaggaagaatgtctcctagtagaggtttatctgggtcccactca
ttggagtcctttaagtctatgaccctaccatcatacaaactacttagcggtggagattta
ctgggaaatagtgcttcgctgagtttagaaactgaaaaagaagaaactaaagaggacaaa
aaacaagagaacaagaagtctgctttgttgtctctagtcacaggaagaaaggaagtagtg
aaaaacaatgatgtagaaaacatgtctgacatgactttgaaggagagagaagccaaactt
cttgaagaaaaaaagaatgaaaaagaggtaaaacctgttgaaatccctaaggactataac
caagaaagtactccaaaaaacagcaacacagcagatattcccagaaacaagaaatcgcat
aacccatttgatgaatcgctcatggaagaagaacagaaaccagacaagtctgcagcctct
gcaaggacaatccaaaccaaagctgtcaaacccagactgggagtgtcttcagaggatgaa
accgaagccacgcttcctacttctgaacctgattccctttctgctttcctttctgcacat
cattctagtaatgacaataaccctttcacttctaaattgggacaaaaaattaaagcacga
gactctagtagccctcttcctccatctctcatttctggacaacgttctaatgataacgct
ttcatttctgactgggaacaggaatccaaagcacaagactcggaaagcttcactagtcct
ctcttgtatttcccccatcctcctgcagctctggggcatgtttcttctcctctcctttct
actcacctttctattgacaataatccttttgtatctaaactgggacaggaatcaaaagtg
caagacttcaaaagctttactagtcctccctctttctcccttccttctgctgtttctagc
aaaagctattgttcctttgcaataaactttgctgattcagagcaccctgcttttgtttct
tcagaggagtctcaaaatgaaagtttgactaatgatacaaatactgtatcaaattctctg
gggtcactgtctgagtcatctcctctacctgtgtacgaaagggttgggcagaccccaaag
aaacagtgtgatgccaaagaggtacagatggtatcaccggataaaaaaaataacagtggc
gttaagaaatcagtgacctttcatcttgatgagttggaatatactgattccagcagaaat
catgctgaggctttagacagagagcagcgtgagagatggcatcctgatccatgtgaagaa
atgttcactactgatccaaccataacagaaaagagagaagggtttgcctctgtgctgggt
atggagtgctaccgttcatctaaactctgtgatgaaagtagttctgttcagaacagtgag
agcactgttcaggatgacattgaagccagcagtacgagtgctgaaacctggatgaaagat
ggcaaagaactgacttctctctccaagtctaattatagcctttcacctgggaatgctgta
atacagccatcttctgctgaaagcaaattaaacgaggagcaagaactatatagtggaaag
aaaagtaagcattcactcaacatggaagaatttgggctcgcattacagtccaaggtaact
catgccatcaaaagtgactcttcagttcaagtagagccgccaaaaccaactccaagagtt
cacacgttgcttcctaaggaccctaacatgtcagaggatgttagtgagctcaatcctcta
tttgcaaagccaaagcctgccccaagaattgcaaagccaaagcctgccccaagaaatgca
aagccaaagcctaccccaagaaatgctgtaaaactagataagtgtgcacctgtttctctg
actggtagactgaaagatgaagagctgcttactccatctgacagcacaatgtctgggtct
ggatttgtgtttcatagagagaatcccatgaacccacatgaaaacccagcaggtgacagc
ttattaaaaacagccactcggtcaactacacatcatcttgacagagatgatagcaataat
ggacccttaaaacacaaaacttatggtcatgatgattcattatttgactctggaacagac
cttaagtctgccattccagttactggagatcagagtctaacacatgttggccttccagtt
attccagaagtaggatcagatgatgagcttctagacagctctcaaaagaacaatgaaatg
actgcaatttataaaagttttccaaatacagaaaatcaatgtatagattcattgtcagtc
actgaggtagaaaaactcagttcaggtatgagctctactgatagagcaagtatattactt
cagaagggagaaggtggtcctgaagatacttttaaatctagcaaatcatccaaactaaat
tcaatagtagacattcatagtgcaagcagcaagactagtgagtcaggtttagatatcctg
tcttatcccagtgagcatggatgtgttgttgaggaacaggaactgaaggaatctagcagt
attaaggaaagtaggaagagtgatttttttgagtcctctgaaaagtctgtttcttttacc
tccctgtccagttcttcccaactctccctttcctctagttccccccaaactggctcttgc
gacagtagtagagcagaatcagtgaaaaagccaccagcagagagcttcaatcataaagtc
gaaaatgctggcaagaagaaggtgcttcgggcatgggtttcaccctctgagacacttccc
aatcaaacacaacagagtggtggaagtgtgtctgttaagcacagacctcatcctgtgaag
ccaatgaacaccacagcaaataagtcgcatactaaaaatttgaccacaaccacaaaaatg
gatgaaaactggactgagagcaatagaaagaaatatgatccttcggaacctgcctatgct
tatgctcaattaacacatgatgagctgatccagctggtgctgagacagaaggataccatt
acaaagagagatctccaggtgcgggagctagaaaactacattgataacttgcttgtcaga
gtcatggaagaaactcccaacattcttcgggctccatctccaaaaaataaggctggaagg
atgtaa
DBGET
integrated database retrieval system
