Trachemys scripta elegans (red-eared slider): 117873017
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Entry
117873017 CDS
T07347
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117873017 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117873017 (LSM1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117873017 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
117873017 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117873017
NCBI-ProteinID:
XP_034617865
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All DBs
Position
2:complement(155461959..155470646)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKER
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccgggcaccgccagcctcatccaggacatcgacaaaaaacacttggtc
ctccttcgagatggtagaacattgataggatatttacgaagcatcgatcagtttgcgaac
ttggtgttacaccagacggtggagcgcattcacgtgggcaaaaaatatggcgacatccct
cgaggcatctttgtcgtgcgaggcgagaacgttgtcctgctgggggaaatagacctggag
aaggagagtgatacgcctttgcagcaggtgtcaatcgaggagatcctggaggaacagcga
gtggaacagcaagccaagcaggaatcggagaagctgaaagtgcaggcacttaaggagcgg
ggcctttcaatcccgcgggcagacactctagatgagtattag
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integrated database retrieval system
