Trachemys scripta elegans (red-eared slider): 117873118
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Entry
117873118 CDS
T07347
Symbol
DTX4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117873118 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117873118 (DTX4)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117873118 (DTX4)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117873118 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_2
WWE_5
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-RING_Vps41
PHD_NSD
zf_RING_Vps8
zf-RING_16
zf-UDP
Motif
Other DBs
NCBI-GeneID:
117873118
NCBI-ProteinID:
XP_034618049
LinkDB
All DBs
Position
2:complement(163960182..163984161)
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AA seq
621 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRAGPRAGSVVLGQADRRLAPYLLDLH
SMHQFRQDTGTIRPVRRSYYDPSSAPGKGVVWEWENDSGSWTPYDMEVGITIQHAYEKQH
PWIDLTSIGFCYVIDFSTMGQINRQTQRKRRIRRRLDLVYPLVTGTLPKSQSWPASPGVS
SSPPTPPCTCPQCLLVMSVKAAVAAGANGGTGTAVPQQQQRKASAQSGGPKPPIPAPGLK
PPDGMATTRGPLKTLASQVGRRQAASTPALSSASSATSPPAANGKVSRASLNTLNRTHLQ
RLAIAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHP
PPVSKSEIKSIPGVANTCRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLST
PSGYKGPQPVVKPDLVGKLSKCGHIYHLHCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQ
PPGKMEYHLIPHSLPGHPDCKTIRIIYNIPPGVQGPEHPNPGKSFTARGFPRHCYLPDSE
KGRKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDANYLD
NVLAELAVQGITEESTAQEKD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggcctcggccgtggtggtctgggaatggcttaacgagcacggccgctggaga
ccctacagcccggccgtcagccaccacatcgaggcggtgatccgggccgggccgcgggcg
ggcagcgtggtgctgggccaggcggaccggcggctggcgccctacctgctggacctgcac
tctatgcaccagttccgccaggataccggcaccatccgcccggtgcggcgcagttactat
gacccctcctcggcaccgggcaagggcgtggtgtgggagtgggagaacgacagcggctcg
tggacgccctatgacatggaggtgggcatcaccatccagcacgcctacgagaagcagcac
ccctggatcgacctcacctccatcggcttctgctacgtcattgacttcagcaccatgggc
cagatcaaccggcagacccaacgcaagcgccgcatccgccgccgcctcgacctggtctac
ccgctggtcaccggcaccctgcccaagtcccagtcatggccagccagccccggcgtttcc
agctcaccccccaccccaccctgcacctgcccccagtgccttctggtcatgagtgtcaag
gcggcagtcgcggctggggccaatggcgggactggcactgcagtcccccagcagcagcag
cgtaaagcctccgctcaatcgggcggccccaagcctcccattccagcacctgggctcaag
cccccagatggcatggccaccacgcgtggcccactgaagaccctggcgtcccaagtgggc
cggaggcaggcggccagcacgccggccctgagctcggccagctctgccacaagtccacct
gccgccaatgggaaggtctcgcgtgccagcctcaacaccctcaaccgcacccacctgcag
cgcctggccatcgcccagtcccgtgtgctgattgcctccggggtccccaccgtcccagtg
aagaacctcaacggctcgagccctgttaaccccgcgctggcagggatcacagggatcctc
atgagtgcggcagggctgcccgtgtgcctcacccgtccccccaagctggtgctgcacccc
ccacccgtcagcaagagcgagatcaaatccatcccgggcgtggccaacacctgccgcaag
accaccaaaaagcaggccaagaaaggtaaaaccccagaggaggtgctgaagaaatacctg
cagaaggtgcgtcatcctccggacgaggactgcaccatctgcatggagcgcctctccacc
ccgtctggctacaaggggccccagccagttgtcaagcccgacctagtggggaagctgtcc
aagtgtggccatatctaccacctccactgcctggtcgccatgtacaacaacggcaacaag
gatgggagcttgcagtgtccaacctgcaaaaccatatatggggtgaagactgggactcag
ccccctgggaagatggaatatcacctcatccctcactcgctgcctgggcaccctgactgt
aaaaccattcggatcatctacaacatccctccgggggtccagggaccagagcacccgaac
cccgggaaaagcttcacagcccgcggattccctcgacactgttacctcccggacagcgag
aagggccgaaaggtgctgaagctgctgctggtggcctgggaccgccgcctgatcttcgcc
atcggtacctccagcaccacaggcgagtcggacacggtgatctggaacgagatccaccac
aagacagagtttggctctaacctcacgggccacggctaccccgacgccaactacctggac
aatgtgctggccgagctggcggtgcagggcatcacggaggagagcacggcccaggagaag
gactga
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integrated database retrieval system
