Trachemys scripta elegans (red-eared slider): 117873171
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Entry
117873171 CDS
T07347
Symbol
RPP40
Name
(RefSeq) ribonuclease P protein subunit p40
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117873171 (RPP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117873171 (RPP40)
03016 Transfer RNA biogenesis [BR:
tst03016
]
117873171 (RPP40)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117873171 (RPP40)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
117873171 (RPP40)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
117873171 (RPP40)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
117873171 (RPP40)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
117873171 (RPP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
117873171
NCBI-ProteinID:
XP_034618146
LinkDB
All DBs
Position
2:complement(168024991..168044627)
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AA seq
364 aa
AA seq
DB search
MSVPLRRLRETPRHLLVCEKSHVRHERSRHAAHVRSHAYNCRVSFLIPECGILPEALKSV
ITDIGEYYLVKNLSLHELVTHEFINTFVKKGSCYALTYNTKIDQDNSAALLPTGKLIISV
DKDTYEELGLQGRPSQYSGKKVMRYIVTIDLTDSAFDPDSKKHKRVLWALKEKKPLEFDF
LLSWYNTGAEGSTLMSYFSKNQIQAHQPKTTFSTLRNLQCPVFHSNELQGKLEESCSAQE
LFEWLGAVCNKVGLDNKSFSFLSTYCCPQPSTVVEQAYLCTITGFIVPEKIIQLLEQLCC
YFDEPKLAQWVTLTVHGFADSPVSWRESEHGFQKGGENLYNFVVFRNLDYWLQMAVGAND
DCPP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcctctgcggcggctccgcgagaccccgcggcacctgctggtgtgcgagaaa
agccacgtgcgccatgagcgctcccggcacgcggcgcacgtgcggagccacgcctacaac
tgccgcgtgtcatttttgatccctgaatgtggaattcttccagaagcactgaaaagtgtt
atcacagacattggagagtattatttggtgaagaatttatcccttcatgaattggttacg
catgaatttatcaatacattcgtgaagaaaggttcatgctatgctcttacatacaacaca
aaaattgatcaagataattctgctgctctactacccactggaaaactaattatatcagta
gacaaggacacatatgaggagcttggactacaaggtcgtccatctcagtattctggtaaa
aaagtcatgagatatattgttaccattgacttgactgactcggcctttgatcctgatagt
aagaaacataaaagagtgctttgggccttgaaagagaagaaacctttagaatttgatttc
ctgctgtcctggtataacacaggtgcagaaggatcaacactgatgtcatacttttccaaa
aaccaaatacaagcccatcagccaaaaacaacattcagcacattaagaaatttgcagtgt
ccagtgttccatagtaatgaactgcaaggaaagctggaagagtcatgcagtgcacaggaa
ctgtttgaatggctaggtgccgtttgcaacaaagttggtttagacaacaagtcatttagc
ttcttatcaacctattgctgtcctcagcccagcacagtagtggagcaagcctatttgtgc
acaatcactggctttatagtcccagagaagataattcagttattggaacagctatgttgc
tattttgatgaaccaaaattggcgcagtgggtgaccttaaccgtacatggctttgcagac
agccctgtttcctggagagaaagtgaacatggtttccaaaagggaggagagaacttatac
aattttgttgtttttaggaacctggactattggcttcaaatggctgttggagcaaatgat
gattgcccaccttaa
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