Trachemys scripta elegans (red-eared slider): 117873215
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Entry
117873215 CDS
T07347
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
tst03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117873215 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117873215 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117873215 (NUP153)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117873215 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
117873215
NCBI-ProteinID:
XP_034618233
LinkDB
All DBs
Position
2:173515576..173579709
Genome browser
AA seq
1439 aa
AA seq
DB search
MASGGGGGGGGSGGGKIRTRRYHLGTSKPYPRNKQQGIISRVTESVKNIVPGWLQRYFNK
SEDECVDASEPTSQQETPVNYHHGYADDDTPVFDGRVTPESTRINLEEPSTSRSALNFSD
VLTRPSLHRSHLNCTMLDSPSAHCQPSTSSAFAIGSSGLSLVKEIKDSTSQHDDDNISTT
SGFSSRASDKDIAVSKNTSVPPLWSTEAERSHSLTQHSATSSKKPAFNLSAFGALSPSLG
NASVLKTSQLGDSPFYPGKTTYGGAAAAARQSKIRITPYQTPVRRQMKAKQANVQSYGVT
SSTARRILQSLEKMSSPLADAKRIPSSVASPLSSPVDRSMLDITRFHSKRKQVESLHPPV
QKLVTPKTISQSMSRLQYFKPSLTPAAESGKIRQRVDVKHKGVREKNLTAEQQVEPSESN
FTYPKFSTPASNGLYSGVGGGGGGKMRRERGVHYVSQPGQEKQEVEAPVLPKIPLPINTT
SLPNFSFGSLASTTVSSSPITNTQPVINKMQPASNASSPVFRFSSPIVKSTEAEVLPPLS
IGFTFSVPVVKSTQASGSSDTPVPLLISPGTTAVNSTSNKKKEKEEYDGAFKPAKVLKEG
SVLDLLKSPDFTSLKTHNPTATQPVSTSTEVYTRPAISNFSAGSLGFRETSKQASSYWRC
DTCLLQNKATDNKCITCQAAKVPTADPAKQTGTLTLSSTVKSTAPATGTLGFGDKFKTAA
GTWDCDTCLVQNKPEATKCVACETPKPGTGVKPALTLPVVTENTITVTSSPSCTETTVTL
GFGDKFKKPKGSWDCTVCLVSNKAEDSKCVACQCERPGGSVPVTSSSTSSFSAPSGGFLG
LDKFKKPEGSWDCETCLVQNKAEATKCIACENAKPGTKPELKGFGTAAVSSDAAAPSFKF
GIQSSSLESSQTLGSTESFKFGEQGGLKFGITSESGSVTNNMTGGFNFSKTSGDFKFGVS
SSDSKSEESKKDSKNNNFNLGLPSGTSNPSTSAFQFGTSNLGQQEKKEEPVLGGFSFGTS
STAPIATLENKTGVSGFSFGTVAEKEVAATPFLFKQSEEKKDETPSAKGGFTFGSMEPAS
ASQFVLGRTEEKQDSVTSATSLVFRKTVDNEEPKAQPVFSFGKSEQTKEESTAKPPFSFN
LTKPGEKETEQTKPAFTFGAQTNTADPGAAKPAFGFLSSGSSSTAIPSTSANSSSVFGSS
SSASNPPPVAAAFLFGQASNTVSSSAFGNASESNAPQSFGFSQENKPATTSSSTGAAVGS
FLFGSGTGSNNTATPGFNFGATTTSSSTGSSSSFVFGSGSSAPAASPSQPPAFGASQTPT
FGQSQGASQPNAPTFGSLSSTSLFSAASQPVPPAFGSVSSSSQPPVFGQQASQQPGFGSG
TTPNSGAVFQFGRSDNFSFTSNSPGVFTFGGNPGAPAPPTQPSGSSGFPFNPTPTFAVG
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcgggggaggcggcggcggcggcagcggaggggggaagatccggacccgg
cggtaccacctgggcacctcgaagccctacccgagaaacaagcagcagggaatcattagc
agagttacagaatcagtgaagaatatcgtaccagggtggttacaaaggtacttcaataaa
agtgaagatgaatgtgtagatgcaagtgaacctacaagccagcaggaaactccagtaaac
taccatcatggttatgcggatgatgacaccccagtgtttgatgggagggtcactcctgag
tcaacaagaattaatttagaagaaccgtccacaagtagatctgcattaaacttctcagat
gtattaacaagaccctctcttcatcggagtcatttgaattgcaccatgttggattcccca
tcagcacattgccagccttccacatcctctgcatttgcaattggcagttctggactctct
cttgtaaaagaaatcaaagattctacctctcagcatgatgatgataacatctcaactact
agtggcttctcctctagagcatctgataaagatatagcagtttcaaaaaatacatcagta
ccaccactctggtccacagaggctgaacgatctcattctctcacacaacattctgctacc
agctctaaaaaacctgcattcaacttatctgcttttggagccctatccccttcacttggt
aatgcttctgtccttaagacaagccagcttggggattctccattttaccctggaaaaacc
acttatggtggtgcagctgcagcagcaaggcaatctaaaatacgaattactccttatcag
acaccagtcagaagacaaatgaaagctaagcaagcaaatgtgcaatcctatggagtgaca
agttccacagcgcggcgcatcttgcagtctctggagaagatgtcaagtcctttagcagat
gctaaaaggattccatcttctgttgcttctccactgtcttctcctgtggacaggagcatg
ctggatattactcgcttccattcaaagagaaaacaggtggaatccctgcaccctccagtc
cagaaattagtgacaccgaagacaatttctcagtcaatgagtcggttacagtattttaaa
ccatctctgactccagctgctgagtcaggcaagattagacagagagtagacgtaaagcac
aaaggagtgagggagaagaatttgactgcagaacagcaagtagagccatctgaaagcaat
ttcacataccccaaattcagtacacctgcatctaatggattatattctggagtgggaggt
ggtggcggtggcaagatgagaagggaaagaggagtacactatgtatctcaaccaggacaa
gaaaaacaggaggtggaggcaccagtactacccaaaatacccttaccaattaatactaca
tcactgcctaacttcagctttggctcccttgccagtactactgtgtcgtcatcaccaatc
actaatacacaaccagtgattaacaagatgcaaccagcaagtaatgctagcagtcctgtg
ttcagattttcatctccaattgtaaaatctactgaggcagaagtgctacctccactgtct
attgggtttacgtttagtgttcctgttgtgaaatcaacacaagcttctggatccagtgat
actccagtgccacttctgattagcccaggtaccactgctgtaaatagcaccagcaataag
aagaaagaaaaggaagagtacgatggcgccttcaagcctgcaaaagtcttgaaagaaggg
agtgtactggatcttctaaaaagtcctgactttacttctctgaagacacacaatcctaca
gccacacagcctgtttcaacaagcacagaagtttatacacggcctgcaataagtaatttt
tctgcaggttcattgggatttagagagacctctaaacaagcctcatcatattggcgctgt
gacacatgtctcttacaaaacaaggcaacagacaacaaatgcatcacctgtcaagctgct
aaagtgccgacagcagatcctgctaaacagactggaacgttgactctaagcagcactgtt
aaatcaactgctcctgcaacaggaacactgggctttggagacaaatttaaaacagcagca
ggaacatgggattgtgatacatgtctagtccagaataaacctgaagctacaaaatgtgtg
gcctgtgagacaccaaagcctggaacaggagtaaagcctgctctaacattgccagtggtc
acagaaaatacaataacagtgacttcctctcctagctgcactgaaactacagtcactttg
gggtttggagacaaattcaaaaaaccaaagggttcttgggactgtacagtgtgccttgtg
tcaaataaggcagaagacagtaaatgtgtagcttgtcaatgtgagagaccagggggttca
gtgcctgtgactagtagcagcacatcctctttctccgctccttctggaggatttctggga
ttagacaaattcaagaaacctgagggaagctgggactgtgaaacatgcttggtacaaaac
aaagcagaggccacaaagtgcatagcttgtgagaatgcaaaaccaggcaccaagcccgag
ctcaaaggttttggtactgctgctgtgtcctcagatgctgctgcaccgtcatttaaattt
ggtattcagtcatcatccttggagtcatctcagacattaggaagcacagaaagttttaaa
tttggagaacaagggggtttgaagtttggtattacatcagagtcgggatctgtaacaaac
aacatgactgggggcttcaatttctctaaaacttcaggggacttcaaatttggagtctct
tcctcagactctaaatcagaggagagtaaaaaagacagtaagaataacaattttaactta
ggacttccctctggtacaagcaatccatctacttcagcatttcagtttgggacatccaat
cttggacagcaggaaaagaaagaggaacctgttttagggggtttcagttttggcacaagt
tctactgcccccatagctacattagagaataaaacaggagtgagtggattcagttttgga
acggtggcagaaaaggaagttgcagcaactccttttttatttaaacagtcagaggagaaa
aaagatgaaactccttcagccaagggaggcttcacttttggcagcatggagcctgcatct
gcctcacagtttgtcttgggaaggacagaggagaaacaggactctgttacctctgctact
tcattagtgttcaggaagacggttgacaatgaggagccaaaggcgcaacccgtcttttcg
tttgggaagtctgagcagaccaaagaagagagcacagcaaaacccccattcagtttcaac
ttaacaaaaccaggagagaaggaaactgagcaaacaaagccagcttttacatttggggca
caaaccaatactgcagatccaggggcagcaaagccagcctttggtttcttgagctctggt
tcctccagcacagccataccaagcacttctgctaacagtagtagtgtgtttggcagctcc
tcctctgcctcaaatcctccaccagttgccgctgcctttttgtttggacaggccagcaac
actgtgagcagttctgcatttggcaatgcctccgaatccaatgcccctcagtcatttggg
ttctctcaagaaaacaaaccagcaaccacatcctccagcacaggtgcagctgttggttca
tttctctttggttcaggaacaggcagtaacaatactgcaacccctggtttcaactttggg
gccacaaccacatcaagttctacaggttcttcctcttcatttgtgtttggctctgggtct
tcagcacctgctgccagtcccagccagccaccagcatttggtgccagccagacaccaaca
tttggtcaaagtcaaggtgccagccagccaaatgctccaacttttggatcattatcatca
acttcattattttcagctgcctctcagcctgtacctccagccttcgggtctgtgtcaagc
agtagtcagcctcctgtgtttggacagcaagcaagccaacagcctggttttggctccggt
acaacacctaattccggtgctgtattccagttcggacgtagtgataatttcagcttcaca
agtaatagcccaggagtgtttacttttggtggaaatcctggtgcaccagcgccaccaacc
cagccttctggctcttcaggatttccatttaacccgactccaacatttgcagtggggtaa
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integrated database retrieval system
