Trachemys scripta elegans (red-eared slider): 117873267
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Entry
117873267 CDS
T07347
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117873267 (CARMIL1)
Membrane trafficking [BR:
tst04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117873267 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
117873267
NCBI-ProteinID:
XP_034618335
LinkDB
All DBs
Position
2:180367570..180616330
Genome browser
AA seq
1432 aa
AA seq
DB search
MSDESSEVPRELLESIKDVIGRKIKISVKKKVKLETKGDKVDNKILVLTSCRAFLLTSRI
PTKLELTFSYLEIQGVTSSKPGQLIVETEKCSISMKMASSEDVNEVMAHIGTCLRKIFPG
LSPVRIMKKVTMEPSERLANLQALWDSQTVTELGPCGGFSQMYACVCDWLGFPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLANALAHNPNSGLHTINLASNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANQLIANTLTYLDLSGNALRGDDLASLYNF
LAQPNAIVHLDLSNTECALDMVCGALLRGCLQHLAVLSLSRTVFSHRKGKEVPPSFKQFF
SSSLALMQISFSGTKLSPEPLKALLLGLACNPNLKEVSLDLSSCELGHCLRSGGAQVLEG
CIAEIHNITSLDISDNGLESDLSTLVIWLSKNRSIRHLALGKNFNNMKSKNLTPVLDNLV
QMIQDEDSPLQSLSLADSKLKTELTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQ
INTKLRTVICDKNNITAQGFQDIAVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQK
IENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGVDAVQED
LKSAERLMRDAKNSKTLLPNLYHLGGASWAGVNGSLSNPIQETLESMAGEVTRVVDEQLK
ALLESMVDAAENLCPNVIKKTHIRQDLIEASTEKISIPRTFVKNVLLEQSGIDILNKISE
VKLTVASFLSDRIVDEILDALSHCHHKLADHLTRRGKPLPNQESLEIELAEEKPTKRSTI
TVEDLTEIERLEDLDTCMTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVP
IHIEDPPFLSSRPDKRTSGFISELPSEEGRKLEHFTKLRPKRNKKQQPSQATVCGSTPQE
GEQNGLMGRVDEGVDEFFTKKVTKMDSKRSSMKRSDTNESSEVGDERKKRDSRKSGFLNL
IKSRSKSERPQTVLVAEEPSSPKGAVKSPAVDTTKKELKSAEQNGSTERAEELKTPDSLE
EIQPEDAARAERGDNKGSPQGGRRYGVQVMGSGLLAEMKAKQERRAASSQKRLGNEVAPR
DSHDTTVSSERLDGSGTVPKLHQTLPENRFALSKGDSVMASLEKNPKTEPKAEAGARARC
SSNTPTSPKPPVQSKPSPTGRPTVPQKPRSASRNEDIPESPGSPKVALLPPVLKKVPSEK
EKDGQSSPQPAIRSFSQDEQTGEYNKRDTDHDSDKPASGGKRASRQYSTSAEEEVNALGH
RKSQPTTAPKRSPGHQTHEYQELKQRSLSKDGQQGSKSSDSGEEADKEFIFV
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgagagctccgaggtgccccgggagctgctagaaagtatcaaggatgttatt
gggaggaagattaaaatttcagtgaagaaaaaagtaaagctagaaaccaagggagataaa
gtggataacaaaatattggtgcttacatcatgtcgggccttcttgttgacatcccgcatt
cccaccaagctagaactaactttcagctacttagaaatccaaggagtaacctccagtaaa
ccaggtcagctgattgttgaaacagagaaatgcagcatttccatgaagatggcttcatca
gaagatgtgaatgaagtgatggcacacattggaacgtgcctcaggaaaatattccctggt
ctgtctccagtgagaatcatgaaaaaagtaactatggagccctcagaaagactggctaat
ctccaggcgctgtgggatagccagactgtaacagaactgggaccttgtgggggattttca
caaatgtatgcatgtgtttgtgactggcttggatttccatatagggaagaggtacagtgg
gatgtggatacaatctatctgacccaagatactagggagttgaatttgcaagacttcagc
catcttgaccacagagacttaatacctatagttgctgccttggaatacaatcagtggttt
acaaagctgtcctctaaggatctgaaattatccactgatgtctgtgagcagatcctgaga
gtggtgagtagatccaatcgattggaagaattggtattagagaatgccgggcttagaaca
gattttgcacagaaactggccaatgccctagcccataatcccaactcaggacttcataca
attaaccttgctagcaaccctcttgaggacagaggtgtgtcctctctaagtatccagttt
gccaaactcccgaagggactgaaacatttaaatttatctaaaacctcattgtcacctaaa
ggggtgaatagcctttcccagtccctgagtgccaaccagctgattgctaacactctcacc
taccttgacctctcagggaatgctctgcggggtgatgatctcgccagcctgtataatttt
ttggcccagccaaatgccattgttcatctggatttatccaacacggagtgcgcactagac
atggtgtgtggagctctcctccgcggatgccttcagcacctagctgtcctcagcctgtcc
agaacagttttttctcacaggaaaggaaaagaagttcccccgtctttcaaacagtttttc
agcagttcacttgctttgatgcaaatcagtttttcggggactaaactctctcctgagcct
ctaaaagcactcttattaggcctggcttgtaatccgaacctgaaagaggtgtctttagat
ctcagtagctgtgagcttggtcactgtttgagatctggaggtgcacaagttctggaaggg
tgcatagcagaaatacacaatatcaccagcctagacatttcagacaatggcctagaatcg
gatctctcaacacttgtaatctggcttagtaaaaatcgatcaataagacacttggcgttg
ggcaaaaattttaacaacatgaaatccaaaaatcttactcctgtactggataatttagta
cagatgattcaagatgaggattcacctttgcagtcactatccctggcagattccaagctg
aagactgagcttaccataattatcaatgcattgggcagcaatacttctcttacaaaagtg
gatattagtggaaatggaatgggagacatgggggcaaagatgctagcaaaagccctacag
ataaacaccaagctcagaaccgtaatatgcgataagaataatatcaccgcacagggcttc
caggacatagcagtggcattggaaaagaattatactttaaggttcatgccaatacctatg
aatgatgcttctcaagcacttaaaacaaaccctgaaaaaacagaagaggcgctgcaaaag
atagaaaactacttgcttcgtaatcatgagaccagaaaatacctacaggagcaggcatac
aggttgcagcagggcatcgtcaccagcaccacacaacagatgattgacagaatatgtgtt
aaagtgcaagatcatctcaactccttaagaaattgtggtgtggatgcggtacaggaagac
ctgaaatctgcagaaaggcttatgcgggatgctaagaactccaaaacactattaccaaat
ttgtaccatctcggtggagcttcttgggcaggagtgaatggctcattatccaatccgata
caggagacactggaatccatggctggggaagtcacaagagttgtggatgaacaacttaag
gcgctgcttgagtctatggtggacgcagctgagaatctttgcccgaatgtgataaagaag
acccacattcggcaagacctgattgaggccagcacagagaagatttccattccacgtacc
tttgttaaaaatgtgctcttggagcagtctggaattgatatcctcaataaaattagtgaa
gtgaagctgactgtggcctctttcctatctgaccgaattgtggatgaaatcctggatgca
ctttcacattgtcatcataaactggctgaccatttgaccagacgtggtaagccacttcca
aatcaggagtcactggagattgaattagctgaagagaaaccaactaagcgctccaccatc
acagtagaggatttgactgagatagaacgtttggaggatctagacacttgtatgactctc
tgctgtacaagtatgactcctaagtctaaaaggaaaagcatccacagtagaatgctccgg
cctgtatctagggcttttgaaatggaatttgacctggataaagcactggaagaagtacct
atccatatagaagacccgccattcctttccagcagaccggataaacgaacttctggattc
atctcagagctgccatccgaggaagggagaaaactggagcactttacaaaattaaggcct
aaaaggaataaaaaacagcagcccagccaagcaacagtgtgtgggtcaacacctcaggaa
ggagaacagaatggcctcatgggtagagtggatgaaggtgttgatgaatttttcaccaag
aaagtgacaaaaatggattcaaagagatcgtcaatgaaacgttcagacaccaatgagtcc
agtgaagtgggtgatgaaaggaaaaaaagagattctcggaaaagtgggtttctcaactta
atcaaatctcgatccaaatctgaacgtcctcagactgtattggtggcagaagagccctcg
tcacccaagggtgctgtcaaaagtccagctgtggacactactaagaaggagttaaaatca
gctgaacagaacggcagcacagagcgagccgaggaactaaaaacaccagactctctagag
gagatacaaccagaggatgctgcaagagcagagaggggtgacaacaaaggcagcccacag
ggagggcgtaggtatggggtgcaagtgatgggcagtggactcctagcagaaatgaaagcc
aagcaggaaaggagagcagcttcttcacagaagagactcgggaacgaagtggctcccagg
gattctcacgataccacagtgagctctgaacggctggatggcagtggtacagtgcctaaa
ctccaccagaccctcccagagaatcgttttgccttgagtaaaggtgactctgtcatggcg
tccttggaaaaaaatccaaaaactgaaccaaaggctgaagctggtgcaagggctagatgt
tcttccaatacgcccacgagtccaaaacccccagtgcagtcaaagcccagcccgacggga
cgtcccaccgttccacagaagccacgctctgcctctcgcaacgaggacatcccagagtct
cctggttcccctaaagttgctctgcttccacctgtgctaaagaaagttccttctgagaaa
gaaaaagatggtcaaagcagcccccagcccgctatcagatcattttctcaagacgagcaa
acaggagagtataacaaaagagatacagatcatgactctgacaagccagccagtggaggg
aaaagagcttcaaggcagtactctaccagtgcagaagaggaggtgaatgcacttgggcac
aggaagtcacagccaacaactgctcctaaaagaagccctggacaccagacccatgaatac
caagaactaaaacagaggtccttaagtaaagatggccagcagggaagcaagtccagtgac
tctggagaagaagcagataaagaatttatttttgtttag
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integrated database retrieval system
