Trachemys scripta elegans (red-eared slider): 117873283
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Entry
117873283 CDS
T07347
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117873283 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117873283 (CTDP1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117873283 (CTDP1)
Protein phosphatases and associated proteins [BR:
tst01009
]
HAD phosphatases
Fcp/Scp phosphatases
117873283 (CTDP1)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117873283 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
RTT107_BRCT_5
BRCT
BSH_CusB
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
117873283
NCBI-ProteinID:
XP_034618371
LinkDB
All DBs
Position
2:complement(181435566..181620991)
Genome browser
AA seq
991 aa
AA seq
DB search
MEETEGAGAAEGPGAAVTEIRVPGPRALRLLEWKVSAGAAVKIGSLLALCAPLPPPGRAA
TPPAQGPGARAPRAAAERRVKAERPGVVRELCARPGQVIAPGGILVRLEGCSHPVVMKGL
CAECGQDLTQLQSKNGKQNVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKL
VLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELH
VFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDD
REDVWKFAPNLITVKKYVYFQGIGDINAPPGSREAQMKKKVNHSSKTTEASDPTVVTAKD
SEEVKNVTCVEEQSNGLRKSTKEMCTTNGSNFMSSETSNLGLNSNDKLNVRDSLSGTIDH
KTNAAVINDSTSVKESQISSEQDDRTVTEKQQTQDKATNNLDFELSSDSESDSGLDARKS
SSSSASDSENEGKRSWKKSKQPVPDENLQQECCTDVSGGKDGQVNHSGEAIAPPSIYPPG
KTVDLEMQEESEQDSLCDLGNGCADKKEAETESQNSEQSGITMGESLDQSMEEEEEEEDT
DEDDHLIYLEEILVRVHTDYYTKYDKYLKKEINEIPDIRKIVPELKSKVLADVTIIFSGL
YPTNFPIERTREHYHATALGAKIIKNLVLNADDPNKATHLIAARGGTEKVRQALDCKHLH
VVNPDWLWSCLERWDKVEEQLFPLKDDYIKTQRENSPATFPDTHSAFQTALFHPTPIHPK
FQPGPEVRLYDSNTGKLIRKGSQSSVQSLYIQSPAPPLTLPVHGEHSSFRVVQPHQQQLF
DEEELPANENEDQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSE
KKKTEEEGEKPQSSATESLGMKIEERPGSSSSSSSERSLTGSVPRGHKRKLDEDDAASES
SKESSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacggaaggagcaggggccgccgagggccccggggcggcggtgaccgagatc
cgggtgccgggcccgcgagcgctgcggttgttggagtggaaggtgtcagcgggagcggcg
gtgaagatcgggtcgctgctggctctgtgcgcgcccctcccgccgcccggccgtgccgcc
acccccccggcccagggccccggcgcccgggccccgcgagcggccgccgagcgccgagtg
aaggcggagcggcccggtgtggtgcgcgagctctgcgcgcggcccggacaggtcatcgcg
cccggaggcattttggtgagactggaaggatgtagccatcctgttgttatgaaaggtttg
tgcgcagaatgtggccaggacttgactcagctacaaagcaagaatggaaaacagaatgtg
ccattatccacagcaactgtatctatggttcatagtgttccagaactgatggttagctct
gagcaagctgaacaactaggacgggaagaccagcagcgactacaccgaaatcgaaagctg
gtgctgatggtagatttggaccagacattaatccatacgacagaacagcactgccaacag
atgtctaataaaggaatattccatttccagttaggtcgaggtgaacctatgctgcatact
cgtttgcgtcctcattgcaaggaattcttagaaaagattgccaagctgtatgaattacat
gtttttaccttcggtagcagactttatgcacatacaattgcaggatttttggaccctgaa
aagaaacttttttctcatcggatattgtcaagagatgaatgtattgatccattttctaaa
acagggaatcttagaaatctcttcccatgtggtgactccatggtttgcattattgatgac
cgagaggatgtttggaagtttgcacccaatttgataactgtaaagaaatatgtgtacttt
cagggtataggcgatattaatgcaccacctggatcaagggaagctcagatgaaaaagaag
gtaaatcattcttcaaaaacaactgaagcatctgatcccacagtggtaacggcaaaagat
tctgaagaagtaaagaacgttacgtgtgtggaagaacaaagtaatggtcttaggaaatct
acaaaagagatgtgtactacaaatggtagtaattttatgagcagcgagacttctaacttg
gggttgaattccaatgataaattaaatgttagagactccttaagtggtaccattgatcac
aaaacaaatgctgccgtcattaatgattcaacaagtgttaaggagtctcagatttcttca
gaacaagatgataggacagttacagagaagcagcagacccaagacaaggcaacaaataac
ttggactttgaactgtctagtgacagtgaaagtgacagtggattagatgctaggaagtca
tcgtcctcttctgcctcagatagtgaaaatgaggggaagagaagctggaaaaaatcaaag
cagcctgtaccagatgaaaatttgcagcaagaatgttgcactgatgtgagtgggggaaag
gatggtcaagtgaaccattctggggaggcgatagctccacctagcatatatcctcctggc
aagacagttgatcttgaaatgcaagaagaaagtgaacaggacagcctttgtgatctggga
aatgggtgtgcagacaagaaagaagcggagacagagtcccagaatagtgagcagtctggg
attacaatgggtgagtctttagatcagagcatggaagaagaggaagaagaggaagacacg
gatgaagatgaccatttaatataccttgaagagatccttgttcgggtgcacactgattat
tataccaagtatgataaatacctgaaaaaggagatcaatgaaattccagacataagaaaa
atagtaccagaattgaaaagcaaggtattggcagatgttaccataatatttagtggactc
tatccaacaaatttccccatagaaagaacccgagagcattatcatgctaccgcacttgga
gctaaaattataaagaacctagtactgaatgctgatgatcccaacaaggcaacccatctg
attgcggcaaggggaggcacagaaaaagtacggcaagctctggactgtaaacatctccat
gttgtaaaccctgactggctgtggagctgcttggagcgttgggacaaggtagaggagcag
ctctttcccttaaaagatgactacatcaaaacacaaagagagaacagtcctgccacattt
cctgatacacacagcgcgttccagactgctctgtttcacccgacgcccatccatccaaag
tttcagccgggtcctgaagttcgactttatgattccaacactggaaagctaatcaggaag
ggctctcagtcttctgtccagtctctgtatatccagtctccagctcctcccctcacttta
cctgtccacggggagcactcatccttcagagttgttcaaccacatcagcagcagctgttt
gatgaagaggagttaccagcaaatgagaacgaagatcaacctggtccatccaaacggaaa
cgccagccaagtatgtccgagacaatgccactgtacacactatgtaaagaggatttagag
agtatggataaagaggttgatgacatcttaggagaaggcagtgatgatagtgacagtgag
aaaaagaagacggaagaggagggagagaaaccacagagtagtgcaacagaatcgctagga
atgaaaatagaagagaggcctggatcatcatcctcatcatcaagtgaaaggagcttaaca
ggcagtgtacccaggggtcacaagcgcaaactggatgaagatgatgctgccagtgaatcc
agtaaagagtccagcaacgaggatgaggaggggagcagttcagaggcagatgaaatggca
gcagcacttgaagctgaattaaatgacttcatgtga
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integrated database retrieval system
