Trachemys scripta elegans (red-eared slider): 117873317
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Entry
117873317 CDS
T07347
Name
(RefSeq) cadherin-7
KO
K06799
cadherin 7, type 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117873317
Cell adhesion molecules [BR:
tst04515
]
Cadherins
Major cadherins
117873317
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117873317
NCBI-ProteinID:
XP_034618444
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Position
2:complement(191990967..192093107)
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AA seq
785 aa
AA seq
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MKLGKVEFCHFLQIIALFLCLSGMNQAELSRSRSKPYFQSGRPRTKRSWVWNQFFVLEEY
MGTDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTL
RAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDA
DDPTYGNSARVVYSILQGQPYFSVEPKTGIIKTALPNMDREAKDQYLLVIQAKDMVGQNG
GLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADVGPNAEMEYK
IVDGDGLGVFKISVDKDTQEGIITIQKELDFEAKTSYTLRIEAANKHVDSRFQSLGPFSD
MTTVKIIVEDVDEPPVFTSRLYSMVVSEAAKVGTIIGTVAAHDPDVSNSPVRYSIDRNTD
LERYFNIDANSGVITTAKSLDRETNAVHNITVLAMESQNPAQIGRGYVAITILDINDNAP
EFAMEYETTVCENAQPGQVIQKISAVDKDDPPSGHQFYFSLTAEAANNHNFTLQDNKDNT
ASVLTRRNGFRRQEQSVFYLPIFIVDSGSPSLSSTNTLTIRVCDCDADGIAQTCNAEAYI
LPAGLSTGALIAILACVLTLLVLVLLIVTMRRRKKEPLIFDEERDIRENIVRYDDEGGGE
EDTEAFDMAALRNLNIIRDTKTRRDVTPEIQFLSRPTFKSIPDNVIFREFIWERLKEADV
DPCAPPYDSLQTYAFEGNGSVAESLSSLDSISSNSDQNYDYLSDWGPRFKRLADMYGTGP
DSLYS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgggcaaagtggagttctgccattttttgcagataatagctcttttcctgtgt
ctttctgggatgaatcaagcagaactctcaaggtccagatcaaagccctactttcaatca
gggaggccgagaaccaagcgcagctgggtgtggaatcaattctttgtgctggaggaatac
atgggtacagaccctctctatgtaggaaagcttcactctgatgttgataaaggagatggc
tccatcaaatacatcttgtcaggcgaaggggcaagttccattttcattattgatgagaac
actggggatattcatgctacaaagaggctggatcgggaagagcaggcctactacacgctc
cgagcacaagcactagataggctgactaataaacctgtggaaccagagtcggagttcgtc
attaagattcaggacatcaatgacaatgaaccaaaatttctggatggcccttacactgct
ggggttcctgagatgtctcccgtgggaacttctgtggttcaggtaacagctactgatgca
gatgaccctacttacggcaacagtgccagagtggtgtacagtattctgcaaggacaacct
tacttttctgtggagccaaagacaggtattatcaagactgcacttccgaacatggatagg
gaggccaaagaccagtatttacttgttattcaagcaaaggatatggttggacaaaatggt
ggactatccgggaccacatctgtaactgtcaccctgaccgatgtaaatgataacccacca
cgttttccacggaggtcatatcagtataatgtcccagagtccttgcctgtggcttcagtg
gtggccagaataaaagctgcagatgctgatgtgggacctaatgctgaaatggaatataag
attgtggatggtgatggccttggagttttcaaaatttctgttgacaaagatacacaggag
ggaatcattactattcagaaggagctggatttcgaagctaagacaagctatacactgagg
atagaagcagcaaataagcatgttgactctcgctttcaaagtctgggaccctttagcgat
atgacaacagtgaagataattgtggaggatgtggatgagccccctgtatttacctcccgt
ttgtattccatggtagtgtctgaagcagcaaaggttggcaccataattggaacagttgca
gcccatgaccccgatgtctcgaatagccctgttaggtactcaatcgaccgaaacacagac
ctggagagatatttcaatattgatgccaacagtggagtcattacaactgccaagtctttg
gatagagaaacgaatgctgttcataacatcactgtcttggctatggagagtcagaaccca
gcacagattgggagaggatatgtggccatcactatccttgacatcaacgacaatgccccc
gagtttgccatggagtacgagaccactgtctgtgaaaatgctcagcctggccaggtaatc
cagaaaatcagtgctgttgataaagatgacccacccagcggtcaccagttctacttcagt
ttgacagcagaagcagcaaataaccacaactttactctgcaagacaacaaagacaacacc
gcgtctgtgctaaccaggagaaatggattccggagacaggaacagtctgttttctacttg
ccaatattcattgtggacagtggctcaccttcacttagtagcaccaataccctcactatc
agagtgtgtgactgtgatgccgacggcatagcccaaacatgcaatgcagaagcatacatc
ttgcctgcaggacttagcactggcgcacttatagcaatacttgcttgtgtactgacatta
ttagtgctggtcttgctgattgtcaccatgagacggcggaaaaaagagccactcattttt
gatgaggagagagatatcagggaaaacatagtcagatatgatgatgaaggcggcggagaa
gaagacacggaggcttttgatatggctgccttgagaaacctcaacatcatccgagacacc
aagaccagaagggatgtgactcccgagattcagttcttgagcagaccaacttttaaaagt
atcccagataatgtcatttttagggaatttatctgggaaagactaaaagaggctgatgtg
gatccctgtgctccgccatatgattccttgcagacatatgcctttgagggaaatggctca
gtagctgagtcactcagctctttagattccatcagttcaaactctgatcagaattatgat
tacctcagtgactgggggcctcgttttaaacgacttgcggatatgtacggaactggacct
gacagcttatactcatag
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