Trachemys scripta elegans (red-eared slider): 117873378
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Entry
117873378 CDS
T07347
Symbol
MYOM1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117873378 (MYOM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117873378 (MYOM1)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117873378 (MYOM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Ig_CD22
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117873378
NCBI-ProteinID:
XP_034618591
LinkDB
All DBs
Position
2:200453394..200552097
Genome browser
AA seq
1715 aa
AA seq
DB search
MMALPFYQKHHQHYDRAYRHKELQSTLSQYQKEEKRKSAVYSHGSTAYTRGSAAYRHGSA
AAYGHESAAAYSHGSAAYGHESAAYSHGSAAYDHESAAQSRRSAAYSLGSESLSKMSSAY
DHESAAHSRRSAAYSLGSESLSKRSAAYSLGSEAYSHGLKDSNIMIEDRSYKLSPKAKRA
KQSLFSEEKENKAIDYVVPVFTGRQVYVSGITDTEEERIKESAAYIARRNLFATGEGISA
TRVATSSSTEEQHEKKSRKVAIRESAERLALKKTLEETEEFHRKLNEDKLLHAPEFVIKP
RSHTVWEKQNVKLHCTVTGWPEPRLTWYKNNVPINVHTHPGKYFIESRYGMHSLEINKCD
FEDTAQYRASAMNVKGELSAYASLVVKRYKGEFDASYFHAGTVTMPLSFGVTPHGYASKF
EIHFVDKFEVTFGREGETMSLGCTVIIHPDIKRFHPEIQWYRNGVLITPSKWVQMHWSGE
RATLTLAHANKEDEGLYTLRVVMGDYYEQYSGYVFVRDADAEMPGAPASPLDVECLDANK
DYVIISWKQPAVDGGSPILGYFIDKCEVGTTHWTQCNETPVKFARFPVTGLIEGRSYIFR
VRAVNKAGISIPSRVSEPVAALDPADRARLRSHPSAPWTGQIIVTEEEPAEGVVPGPPSD
LHVIEATKNYVVLSWKPPGERGHEGVMYFVEKCTAGTENWQRVNTEIPVKSPRFAVFDLA
EGKSYRFRVRCCNSAGIGEPSEATEATVVGDKLDIPKVPGRIIPTRNTDTSVVVTWTESK
GAKELVGYYVEASIAGSGHWEPSNNNPVKGTRFICHGLLTGENYIFRVRAVNAAGLSEYS
QESEAIEVKAAIGGGLLHGVCPELSGKAGGLTDYTTSWEGMHESSQPIFDTDALLKCNAK
FNRHVLPSSSDKLGSTGVSEVRETVKNVPTPSPQKGAAKQASKTQPGDPLALEKMKEKKD
IAAPSPPYDITVLESVRDSMVLGWKQPKIIGGAEITGYYVNYREVIDGVPGKWNEANIKP
VSERAYRIHNLKENMVYQFQVAAANLAGVGTPSPPTRSFKCEEWTIAVPGPPHDLLCTEV
RKDSLVLLWKPPVYIGRNPVTGYYVDVKETEATDEHWRSVNEKPIANKFLKVSGLKEGVS
YLFRVRATNQAGVGKPSDTTDPVIAETRPGTKEMEVDVDDNGVISLNFECDQMSPDSKFV
WSKNYEPIEDESRLAFDAKGGKSKAAFKDLGEDDLGIYSCAVTDTDGVSSSYTVDEEEMK
RLLALSHEHKFPTVPLKSELAAELLEKGQVRFWLQAEKLSGNAKVNFVFNDKEIVNGEKY
KMKVDHNTGLIEMIMDKIEDNDEGTYTFQLQDGKATNQSSLVLIGDVFKKLQNEADFQRQ
EWFRKQGPHFVEYLGWEVTADCNVLLKCKVANIKKETHIVWYKDGREIMVDEEHDFKDGV
CTLLISEFSKKDAGNYEVILKDDRGKDKSKLKLVEAAFADLMNEVCRKIAVSATELKIQS
TAEGIRLFSFVNYYLEDLMVSWLHNDAKIKYTDRVKTGVTGEQIWLQINEPTPQDKGKYI
MELFDGKTTHTRKLDLSGQAFDEACIEFQRLKQAAVAERNRARILGGLPDVVTIQEGKAL
NLTCNVWGDPVPEVTWLKNEKPLTADAHCILKYESGKSASFTMTGVNTIDSGRYGILVKN
KYGTETSDFTVSVFIPEGEDEVSQPEPSKGDKKKV
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgatggctttacctttctaccagaaacatcaccaacactatgaccgtgcgtaccgccac
aaagagctgcaatccactctgagccagtaccaaaaggaggagaagcgtaaatcggctgtc
tacagtcatgggtctacagcctacactcgtggatctgccgcctaccgccatgggtctgca
gcagcttacggtcatgagtctgcagcagcctacagtcatggatcagcagcctatggtcac
gagtctgcagcctacagtcatggatctgcagcctatgatcatgaatctgcagctcagagt
aggaggtctgctgcctacagtcttggatcagaatccctcagtaagatgtcttcagcctat
gatcatgaatctgcagcgcacagtaggaggtctgctgcctacagtcttggatcagaatcc
ctcagtaagaggtctgctgcctacagtcttggatctgaagcctacagtcacggactaaaa
gattccaatataatgatagaagatcgatcctataaattgagtcccaaagcaaagagggca
aagcagagtttattctctgaggagaaagaaaataaagccattgactatgtagtaccagtg
ttcacaggacgtcaagtgtatgtcagcggaattacagatacagaagaggaaagaattaag
gagagtgctgcatacattgccagaaggaacctctttgctacaggcgaaggaattagtgca
actagagtggccacttcatcctctacagaagagcagcatgaaaagaagtcaaggaaagta
gcgatacgagagtcagctgaacgtctggccctgaagaaaacgttagaagagactgaggaa
tttcacagaaagctgaatgaagataaacttttacatgctcctgagtttgttatcaagcct
cgttcccatactgtctgggagaaacagaatgtcaaattacattgtactgtgactggctgg
ccagaaccccgtcttacatggtacaaaaacaatgtgcccatcaatgtgcatactcaccct
ggcaagtatttcattgaaagtcgatatgggatgcactcactggagattaacaaatgtgat
tttgaagacaccgctcagtatcgagcttctgctatgaatgttaaaggagaactttcagct
tatgcttcccttgtggtaaagagatataagggagagtttgatgcaagttattttcatgct
ggaactgttaccatgcctctcagctttggtgttaccccccatggctatgcttccaaattt
gaaatccactttgttgacaagtttgaggtaacctttgggagagaaggagagacaatgagt
ctgggttgtacagttatcattcatcccgacattaagcgcttccacccagagatccagtgg
tacaggaatggtgttcttattacaccatccaagtgggtccagatgcattggagtggggag
cgggctacgttaacccttgctcatgctaacaaggaggatgaaggtctttacactcttcgt
gtggtcatgggggactactatgaacagtacagtggttatgtctttgttcgagatgcagat
gctgaaatgccaggagccccagcttctccactggatgtggagtgcttggatgctaacaag
gattatgtcatcatctcctggaaacaacctgctgttgatggtggaagccccatccttgga
tactttattgataaatgtgaggttggcaccactcactggacccaatgcaatgagactccg
gtgaagtttgctcgtttccctgtcacgggtttgatagaaggtcgctcctatatattccga
gtccgggcggtgaataaagctggaataagcataccatcacgggtttctgagcctgtggcg
gctctggatcccgctgacagagctaggcttagaagtcacccttctgctccctggacagga
cagattattgtcactgaggaagaacctgcagagggtgttgttcccggcccgccatcagat
ctccatgttattgaagccaccaagaactatgttgtgcttagctggaaaccccctggagaa
cggggtcatgagggtgtcatgtactttgtggaaaagtgtactgcaggcacagagaactgg
cagagagtgaacactgagatccctgtaaagtctcctcgctttgctgtttttgacttggct
gaagggaaatcttaccgtttccgtgttcgctgttgtaattcagctggcattggtgagccc
tcagaagcaactgaagctactgtggtgggtgacaaacttgatattcccaaagtcccaggc
cgtattataccaaccaggaatacagatacctcagtggttgtcacttggacagaatctaaa
ggtgccaaggagttggttgggtactacgtagaagcaagcatagctggatctggccattgg
gaaccaagcaataacaatccagtgaaaggcacaagattcatttgccatggactcctcact
ggtgagaactacattttccgagtcagagctgttaatgcagctggactcagtgaatattca
caggaatcagaggctattgaagtcaaagcagccattgggggaggattgcttcatggtgtg
tgtcctgaactgagtggtaaagctggtggactaacagactacactacctcctgggaaggc
atgcatgagtcctcccagcctatttttgacacagatgctttgctaaaatgcaatgctaaa
tttaacagacacgtgctacccagtagctctgataaactggggagtacaggagtcagtgaa
gtaagagaaacggttaagaatgttcctacaccttcaccacagaagggagctgctaagcag
gcaagtaagactcaacctggggaccctttggcattggagaaaatgaaagagaagaaagat
atagctgccccatctccaccttatgacatcactgtacttgaaagtgttcgtgactcaatg
gtgctaggatggaaacagcccaaaatcattggcggagctgaaattactggctactatgtg
aactatcgtgaagtgattgatggagttcctggaaaatggaacgaggccaacattaaacca
gttagtgagagggcctacaggattcacaatttgaaggaaaacatggtgtaccaattccaa
gtggctgctgctaacctagctggggtcggcacaccctccccacctactcgatccttcaaa
tgtgaagaatggaccattgctgttccaggaccaccccatgatctcttatgcactgaagtt
agaaaagactctttggttttactgtggaaaccaccagtttacattggccgtaatcctgta
actggttactatgttgatgtaaaggaaacagaagcaacagacgaacattggaggagtgtc
aatgagaagccaattgcaaataaattcttaaaggtcagtggcctaaaggaaggtgtcagc
tatctattccgggtgcgagcaacaaatcaggctggtgtcgggaaaccttctgataccact
gaccctgtcatagcagaaacacgaccaggaactaaagaaatggaagtagatgtggatgat
aatggagtcatttccctgaactttgaatgtgaccagatgtctccagactctaagtttgtc
tggtccaagaattatgaaccaattgaggatgaatctcgattagcctttgacgccaaaggc
ggaaagtcaaaagctgcttttaaagatcttggggaagatgatttgggcatttactcttgt
gctgtcacagacactgatggagtttcatcaagctacacagtagatgaggaagagatgaaa
cgcctgctcgctctcagccatgagcacaaattcccaactgtcccacttaagtctgagctg
gcagctgaacttctggagaagggacaagtgcgattctggctgcaggctgaaaagctgtct
ggcaatgcaaaggtcaactttgtatttaatgacaaggaaattgttaatggagagaaatat
aagatgaaggtggaccataatactggccttattgaaatgatcatggataaaattgaggac
aacgatgaagggacttataccttccagcttcaggatggaaaagcaacgaaccaatccagt
cttgtccttattggtgatgtgttcaagaagctacagaatgaagcagactttcagaggcaa
gagtggttcaggaaacaaggtcctcattttgttgagtatctgggatgggaagttaccgct
gattgcaatgtgttgttgaaatgcaaggtggctaatattaagaaggaaacgcacattgtt
tggtacaaagatggaagggagataatggtggatgaggagcatgactttaaggatggcgta
tgtactctgctgatatcagagttttccaagaaagatgctggtaattatgaagtaatactg
aaggatgacagaggaaaggacaaaagcaaactgaaacttgtggaagcagcttttgcagat
ctgatgaatgaagtgtgcagaaagattgctgtatctgcaacagaactgaaaatccagagc
acagcagagggtatcagattattctcttttgttaattattacttggaagatctgatggtg
agctggttacacaatgatgccaagattaagtatacagacagagttaagactggtgttact
ggggagcagatctggttacagatcaatgagccaactccacaggacaagggcaaatatata
atggagctctttgatggtaaaactacacatacaaggaagctggatctttctggacaagcc
tttgatgaagcctgtattgaattccaaagattaaaacaagctgctgttgcagaaagaaat
cgtgcccggatacttggaggtttgcccgacgttgtcaccatccaggaaggcaaggcgctt
aatcttacttgcaatgtctggggagatcctgtcccagaggttacgtggctgaagaatgag
aaaccgttgacagcagatgcccactgcatcctgaaatatgaatctggaaaaagcgccagc
ttcactatgactggtgttaacacaatcgactctgggagatacggcattttggtgaaaaac
aaatacggcacagaaacaagtgatttcactgtaagtgtgttcatacctgagggagaagat
gaagtatctcagcctgagcccagtaaaggagataaaaagaaagtgtga
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integrated database retrieval system
