Trachemys scripta elegans (red-eared slider): 117873545
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Entry
117873545 CDS
T07347
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117873545 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117873545 (VCPIP1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117873545 (VCPIP1)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C64
117873545 (VCPIP1)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117873545 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117873545
NCBI-ProteinID:
XP_034618914
LinkDB
All DBs
Position
2:complement(223322177..223350148)
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AA seq
1213 aa
AA seq
DB search
MSQPPPPPPPPSQQQQPPPPVSKKRDRRIFSGTCPDPSCQARLFFPAHGPLSSGSIECTD
CGQRHEQRQLLGVEEVTDPDLVLHNLLRNALLGVSGGGPPRKNTELVKVMGLSNYHCKLL
SPILARYGMDKQTGKAKLLTEMNQGDIFDCALLGDRAFLIEPEHVDTMGYGKDRSGSLLY
LHDTLEDIKKANNSQDCLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHFKENL
SRYKALFHDFIDAVEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLS
GMRSSGDYSATFLPGLVPVEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPKLP
MKLLPKAWGVPQDLIKKYIKLEEDGCVIGGDRSLQDKYLLRLVAAMEEVFMNKHGIHPSL
VADVHQYFYRRTGVIGVQPEDVTAAAKKAVVDNRLHKCLICGALSELHVPPEWLAPGGKL
YNLAKSTHGQLRPDKNYSFPLNSLVCSYNSVKDVLVPDYSLSSLTACNWCHGTLVRRVRG
DGSVVYLDGDRTNTRSTGGKCGCGFKHYWDGKEYDNLPEAFPITLEWGGRVVRETVYWFQ
YESDTTLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNIDSA
HVQRADDIQQGQDLDSQLPTKIILTGQKMKTLHKEELNMSKTERTIQQNIADQASVMQKR
KTEKLKQEQKGQPRTTSPAAVRDGPSSAPATPTKTPYSPTSTKEKKIRITTNDGRQSMLT
LKSTTTFVELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGDKITIEI
FKGKEEGSQSTSATSSHAVKHEDVAVTSKISSKELQEQVDKEMYSLCLLATLMGEDVWSY
AKGLPHLFQQGGVFYSIMKKTTGLADGKHCTFPYLPGKNFVYNAAEDRLELCVDAAGHFP
IGPDVEDLVKEALSQVRAEATSRSREASPSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGH
SLGTASSSQQLDQKSRETPLLRKHNTDTDFNPSPTKIEPSIFTAASGNSELIRIAPGVVT
MRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNAEQSASIDLPQRKVEAVSSSPK
TGSIQANLPESFSVTGGTEHSNTETSAGNVVNSMGATFHTRPKAQKGNSVEEAEEMDSQD
AGIANTTEPMDHS
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccgccgccgcctcctcctccgccttctcagcagcagcagccgccgccgcct
gtctcgaaaaagcgggaccggcgcatcttctccggaacctgcccggaccccagctgccag
gcgcgcctgttcttcccggcccacgggccgctgagcagcggcagcatcgagtgcacggac
tgcgggcagcgccacgagcagcggcagctgctgggggtggaggaggtgacggacccggac
ctggtgctgcacaacctgctgcggaacgcgctgctgggggtgagcggcggggggccccct
aggaagaacacggagctggtcaaagttatgggcctgtccaactaccactgcaagctgctt
tcccccatcctggcccgctatggcatggacaagcaaacgggcaaggccaagcttctcact
gagatgaaccagggggatatctttgactgtgctctcctgggtgaccgcgccttcctcatc
gagcctgagcatgtcgacactatgggctatggcaaggaccgctccggcagcctcctctac
ctgcatgacaccctggaggacatcaagaaagccaacaatagccaggactgcctgatccct
gtccacgtggatggtgatggccactgcctggtccatgctgtctcacgggcactggtgggc
agggagctgttctggcatgcgcttcgggagaacctgaagaagcacttcaaggagaacctg
agccgctacaaggctctcttccatgatttcattgacgcagtagagtgggaggacataatc
aatgagtgtgaccctttgtttgtccctccagaaggtgtgccattgggcctgcgaaacatt
cacatctttggtttggccaatgtgcttcaccggcccatcatcttgctggattccttgagt
ggaatgcgcagttctggagattactcggccactttcctccctgggctggtaccagtagag
aaatgcatgggaaaagatggcatgttgaacaaacctatctgtattgcatggagtagctct
ggacgtaaccattatattcctctggttggaataaaaggtgctgctttaccgaaactgcct
atgaaattacttcctaaagcttggggagttcctcaggatctcatcaaaaagtacatcaaa
ctggaggaggatggttgtgtgattggaggagatagaagtttgcaagacaaatacttactg
aggctggttgctgcaatggaagaggttttcatgaataagcatggtattcatcccagttta
gtagctgatgtacatcagtatttttacagaaggactggtgtaataggagttcagcctgaa
gatgttactgcagctgccaaaaaagcagtcgtggataaccgccttcacaagtgtctaatc
tgtggtgccctttcagagcttcatgttcctccagaatggctggctcccggagggaaacta
tataacctggccaaaagtacccatggccagctgaggcctgacaaaaattacagtttccct
ctgaacagtttggtgtgctcttataattctgtgaaggatgttctggtaccagactacagt
ctgagtagtttgactgcttgtaactggtgtcatggtaccttggtgcgtcgtgtcagggga
gatggatctgttgtatatctggatggggacagaactaatactagatccactggtggcaaa
tgtggctgtggattcaagcactattgggatggtaaagaatatgacaatctccctgaagcc
tttcctattactttagaatggggtggaagagtggtgagagagactgtatattggttccag
tatgaaagtgatacaactcttaacagtaatgtgtatgatgttgcaatgaaacttgttacc
aaacattttcctggtgaatttggtagtgagattcttgttcagaaagttgtcaatacaata
ttacatcagactgccaaaaagaaccctgatgattatactcctgtaaatattgatagtgct
catgtgcaaagagctgatgatatacaacaaggacaagacttagattcgcaacttccaacc
aaaattattcttactggacagaaaatgaaaactttgcacaaggaagagttaaatatgagt
aaaactgaaagaactattcaacagaacattgcagaccaggcttctgtgatgcagaaacgg
aaaactgaaaaattaaaacaagaacaaaaagggcaacctaggactacttcccctgccgct
gttcgtgatgggccatcatctgctcctgctacgcctacaaagaccccttattctccaact
tctacaaaagaaaagaagatccgaataacaacaaatgatgggcgacagtctatgcttaca
ttgaagtccacaaccacattcgtggagctgcaggaaagtatagccagagaatttaatatt
cctccatacttgcaatgtattcgctatggctttcctcccaaagagcttctgccacccaag
gaaggaatggaaaacgagccagttcccttgcagcatggtgataaaataactatagagatc
ttcaaaggtaaggaagaaggtagtcagtctacttcagcaacctcaagtcatgctgtgaaa
catgaagatgttgcagtaaccagtaaaatatcttccaaggagttgcaagagcaagttgat
aaagaaatgtactcactgtgtcttctagcaacattaatgggagaagatgtttggtcatat
gcaaaggggcttcctcacttgtttcagcagggtggggtgttctacagcataatgaagaaa
actaccggtctggctgatggcaagcactgtacttttccatatctgcctggtaaaaacttt
gtgtataatgcagcagaagatagattagagctgtgtgtagatgctgctgggcatttccct
attggtcctgatgttgaagacctggttaaagaggcattaagtcaagtacgagcagaggct
acttcaagaagcagggaagcgagtccttcacatggacttctgaaattaggtagcggtgga
gtagtaaaaaagaagtctgagcaactgcataatgtaactgcatttcaaggaaagggccac
tcactaggaactgcatctagtagccaacaacttgatcagaaatccagggaaacaccactt
ttaagaaagcataacacagacacagacttcaatcctagtcccactaaaatagagccttct
atattcacagctgcttctggtaacagtgagcttatccgcatagctcctggagtagtgaca
atgagagacagcaggcagcttgaccctaccttgattgaggcacagcgaaaaaagttacag
gaaatggtttcttctattcaggcatcaatggacagacacctgcgggatcagaatgcagag
cagtcagcatcaatcgatctgccacaaaggaaagtagaagcggtgagttcatcacctaaa
actggcagcattcaggctaatttgccagaatctttctccgtaacaggtggcactgaacat
tcaaatacagaaacatctgctggcaacgtggtaaattcaatgggagcaacattccacaca
agacctaaagcacaaaaaggaaattctgttgaggaggctgaggagatggatagccaagat
gcaggaattgctaatacaactgagccgatggatcactcttga
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integrated database retrieval system
