KEGG   Trachemys scripta elegans (red-eared slider): 117873734
Entry
117873734         CDS       T07347                                 
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tst03009]
    117873734 (DCAF13)
   04121 Ubiquitin system [BR:tst04121]
    117873734 (DCAF13)
Ribosome biogenesis [BR:tst03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    117873734 (DCAF13)
Ubiquitin system [BR:tst04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117873734 (DCAF13)
SSDB
Motif
Pfam: Sof1 Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st eIF2A MIOS_WD40 ANAPC4_WD40 Beta-prop_WDR35_TULP_N KNTC1_N Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Tricorn_2nd
Other DBs
NCBI-GeneID: 117873734
NCBI-ProteinID: XP_034619323
LinkDB
Position
2:247710751..247754624
AA seq 445 aa
MRVKVLSRNPDDYIRETKQDLQRVPRNYDPALHPFEVPREYMRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPQSLSTVLSGACDGEVKIWNLTKRECIRTLQAHEGFVRGICTRFC
GTSFFTVGDDKTVKHWKMDGPGYGGEEEPLHTILGKTVYTGIDHHWKEAVFATCGHQVDI
WDEQRTSPICSLTWGVDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKKVILDMR
TNTLCWNPMEAFIFTSANEDHNLYTFDMRFLESPVMIHIDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKGRSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLVPRERAAMNYNQKLKEKFQHHPQIKRIARHRHLPKAIYSQAKELRIMREARRRKELN
RRKHSKPGSSPFVSEKKKHIVAVVK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggtgaaggtgctgagccggaacccggatgattacatccgcgagaccaagcaggat
ctccagcgcgttccaagaaactatgatcctgcattgcatccgtttgaggttccacgagag
tatatgcgagccctgaatgcaacaaaattagaacgcgtgtttgcaaaaccttttcttgct
tcgctggatggtcacagggatggagttaattgtatggctaagcatccacagagtttatct
acagtactttctggggcctgtgatggagaggttaaaatttggaacttgaccaagcgagaa
tgcatccgtactttacaagcgcatgagggctttgtacgagggatatgtactcgcttttgt
ggtacctctttcttcaccgttggtgatgataaaactgtaaagcactggaaaatggatggc
ccgggatatgggggagaagaagaaccattgcatacaattcttggaaagacagtgtacaca
ggaattgatcaccactggaaggaagctgtatttgcaacttgtgggcatcaagtagacatc
tgggatgaacaaaggaccagtcccatatgctctttgacatggggtgttgatagcatcagc
agtgttaaatttaatccaattgagacgtatcttttaggaagctgtgcttcagacagaaat
attgtgctgtatgacatgaggcaatcaactccattaaagaaggttatcttggacatgagg
acaaatacactctgttggaaccccatggaagcttttattttcacttcagcaaatgaggac
cacaacttgtatacgtttgacatgcgctttcttgagtcgcctgtaatgattcacatagat
catgtgtctgcagttcttgatgtggattactcccccactgggaaagaatttgtatctgcc
agctttgataaatctattcgcatttttcctgtagacaaaggtcgcagcagagaggtatat
catacaaagcgaatgcagcatgtcatcactgtcaagtggacctctgacaacaagtatatt
ctgtgtggctcagatgagatgaacattcgtctgtggaaagctaatgcttctgaaaaactg
ggcgtgcttgtaccacgagagagagcagctatgaattacaaccaaaagttgaaggagaag
ttccaacaccaccctcagatcaaacgcatagctcgtcaccgtcacctgcccaaagccatc
tacagccaggccaaggaactgcgcatcatgcgagaagctcgtcggcggaaggaactgaat
cgccgtaaacacagcaagccgggatcctcaccatttgtgtcagaaaagaagaagcatatt
gtggctgtagtaaaataa

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