Trachemys scripta elegans (red-eared slider): 117873774
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Entry
117873774 CDS
T07347
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117873774 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117873774 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117873774 (TAF2)
03036 Chromosome and associated proteins [BR:
tst03036
]
117873774 (TAF2)
Peptidases and inhibitors [BR:
tst01002
]
Metallo peptidases
Family M1
117873774 (TAF2)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117873774 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
117873774 (TAF2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117873774 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
117873774
NCBI-ProteinID:
XP_034619411
LinkDB
All DBs
Position
2:complement(258943014..259038770)
Genome browser
AA seq
1200 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPNVEGSMAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDAAMVAVSNGDLVETIYTHDMRKKTFHYLLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFVD
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRYLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKKELDQIVVYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQEESILALE
KFPTPASRLALTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
SCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLKAIRILQKNGHVPSDPALFKTYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWL
LNMVQNDPVPYVRHKILNMLMRNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVANSQEPMNNPNNHGQL
IGFQSTEDDHLVKETASSVSVHQQGVKRKADMPLGSPLEPGQIPEKNEDSKVKLKIRFSN
SQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSLELNMLPVPAAPLSVFSKESNS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKEKEPFTFSNSPASGRSIRSPSLSD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaagaaaggagacaagggatttgagagcccaagaccttataaattaacccac
caggtagtctgcatcaacaacataaattttcagagaaagtctgttgtaggttatgtggaa
ctgactatatttcccacggttgcaaacctgaatagaatcaaactgaacagtaaacaatgc
aggatatacagagtaagagtcaatgatctggaagcagcttttatttataatgatccaaca
ctggaggtttgtcaccatgagtcaaagcagagaaatctcaactatttttccaatgcttat
gctgctgcggtcagtgctgtggacccagatgctggaaatggagaactctgcattaaggtt
ccttcggagctgtggaaacacgttgatgagttaaaagtcctaaaggtgcacataaatttt
tctctggaccagccaaagggaggccttcattttgtggtgcctaatgtagaaggtagcatg
gcagagagaggggcccatgtcttttcttgtggatatcaaaattctacaaggttttggttt
ccttgtgttgattcatactctgaactgtgcacatggaaactagaatatacagtagatgct
gcaatggtggctgtttcaaatggagatttggtggaaacaatatatacccatgatatgaga
aagaagacctttcattacttgctgactattccaactgcggcttctaacatctctctggcc
ataggaccctttgaaatccttgttgatccatacatgcatgaggtgactcatttttgttta
ccacagcttctcccattgctcaaacacaccacgtcataccttcatgaggtctttgaattc
tatgaggagattcttacctgtcgctacccttactcctgtttcaagactgtttttgtagat
gaagcatatgttgaagtagctgcttatgcttctatgagtatttttagcacaaatctttta
cacagtgcaatgattatagatgagactccactgacaaggagatacttagctcaagctctg
gctcagcaattttttggctgttttatatccagaatgtcctggtcagatgagtgggtgctg
aagggaatctctggctatatttatggcctttggatgaaaaaaacctttggtgtcaatgaa
tatcgccactggattaagaaggagctagaccaaatagtggtatatgaactgaagactggc
ggagttttactgcatccaatatttggaggaggaaaagagaaagacaaccctgcatcacat
ctacatttttctataaaacacccccacacgctctcctgggaatattacactatgttccag
tgtaaagcccatcttgttatgagattgatagaaaacaggatcagtatggagttcatgcta
caagttttcaacaaactgttgagtctggccagcactgcctcgtctcagaagttccagtct
cacatgtggagtcagatgctggtttccacatctggatttttgaaatccatctctaatgtc
tctggcaaagacatccagcctttaataaaacagtgggtggatcagagtggtgtggtaaaa
ttttatggcagttttgcgtttaatagaaaacgaaatgtattggaattggaaataaagcaa
gactacacttctcctgggacccagaaatatgtgggtcctcttaaagtaacagtgcaagaa
cttgatggatctttcaaccatacattgcagatagaagaaaacagtcttaaacatgatata
ccttgccattccaaaagcagaagaaataagaaaaaaaagattccattaatgaatggagaa
gaggtggacatggatctttctgcaatggatgctgattctcctttactctggattagaata
gatccagatatgtctgtattgaggaaggtagaatttgaacaagctgacttcatgtggcaa
tatcagcttcggtatgaaagagatgtagttgcacaggaagaatccattttggcattggaa
aagttcccaactccagcatcgcgacttgccctgactgatatactagaacaagagcaatgt
ttctaccgagtgagaatgctggcctgcttctgtcttgcaaagattgcaaattccatggta
agtacatggacaggaccaccagccatgaagtcactctttacccgaatgttttgttgtaaa
agttgtccaaacattgtgaagaccaacaacttcatgaactttcaaagctactttctgcaa
aagactatgcctgttgccatggccttgctgagggatgttcataacctctgtcctaaagag
gttttaacatttattttagacctaatcaagtacaatgacaacaggaaaaataagttttca
gacaactattaccgtgctgaactgattgacgcactagccaactctgtaactcctgcagtc
agtgtgaacaatgaagttcgaactctggataatttaaatcctgatgttcgactcatactt
gaggaaattaccaggttcttaaatatggaaaagcttctgcccagttacagacataccatt
acagtcagctgtctgaaagccattcgtatacttcagaagaatggacatgtccccagtgat
cctgctctctttaaaacatatgcagaatatggacactttgtggacatccgaatagcagct
ttggaggccgttgttgattacacaaaagttgatcggagttatgaggaattacagtggttg
cttaacatggttcagaatgatcctgtaccttatgtaagacataagattttgaacatgctg
atgaggaatccaccctttactaagaacatggagtctcccttgtgcaatgaagctttggtg
gatcagctttggaaacttatgaattcaggtacttcacatgactggaggctccgatgtggt
gctgtggacctgtacttcacactttttggcctcagtagaccttcttgtttgccattacca
gagcttggactggtccttaatctgaaagaaaagaaagctgtacttaatcctaccatcatc
cctgagtcagtggcaaacagtcaggaacccatgaacaatcctaacaatcatggacaactg
ataggattccaaagcactgaggatgatcatcttgttaaagaaacagcatccagcgtttct
gttcatcagcaaggggtgaagaggaaggctgatatgccacttggatccccattggagcca
gggcagataccggagaagaatgaagacagtaaagtcaaactaaaaatcagattctcaaat
tctcaggaagaggaggaaattgatatggacactgttcatgatagtcaagcttttatctac
catcatttgaatatgttggagagaccatcaacaccaggtaaagaacagtcttcactagag
ctgaacatgcttccagtgccagcagctccactctctgtgttcagcaaagaatccaattcc
tcaaaacacagtgatcatcaccaccaccaccaccatgagcacaagaaaaagaagaaaaag
cataaacataagcataagcataaacataaacatgacagcaaagaaaaagagaaggagccc
ttcactttctccaacagcccagccagtggacggtcaattcgctctccatcactttcggac
tga
DBGET
integrated database retrieval system
