Trachemys scripta elegans (red-eared slider): 117873828
Help
Entry
117873828 CDS
T07347
Symbol
PHF20L1
Name
(RefSeq) PHD finger protein 20-like protein 1 isoform X1
KO
K18402
PHD finger protein 20
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117873828 (PHF20L1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117873828 (PHF20L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD20L1_u1
PHD_5
Tudor_2
Tudor_3
PHD
MBT
SH3_Hsr9
DUF4537
Tudor_4
Motif
Other DBs
NCBI-GeneID:
117873828
NCBI-ProteinID:
XP_034619531
LinkDB
All DBs
Position
2:267064704..267146639
Genome browser
AA seq
1091 aa
AA seq
DB search
MSKKPPSRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW
DSNRLRPLERPALRKEGLKDDDEFIDFKPGEEVLARWTDCRYYPAKIEAINKEGTFTVQF
YDGVIRCLKRMHIKSMPEDAKGQAREREQIAPELRLVTEIEPKEDWIALVKAAAAAAAKN
KAGSKPRTSANSNKDKEERKWFKVPSKKEETSTSTIIQEVQKKEEEPTSSETFVGFPVVD
IPKMAFVRAESTLSHKRKSNLGNSFQAKRARLNKITGLLASKAVVVDGAEKKEGNKETAP
VLEQEISPKPQSQKKNEADISSSTNTQKPALLSSTLSSGKARSKKCKQESGDSSGCIKPP
KSPLSPELIQVEDLTLVSQLPSSVINKTNLFLGPSQPVNPPRSYKYSQRRRRSQRLATCS
LPDESIQKVPSPSPVTDGKVFSISAQNQQPSISEVPDVAHMSLEKRGPCLPLDLSRSLEV
TAPLSTESTFRNEYPSKEKEDTQMITYHSSKAVTDGRVATTASAPSSHVHALHLEMPLTN
SLKLPKGNSKKKRSSTSVSSEGTEIQFSVPVKEKCFENLQEKMLKKVIEKDKHSEVGILK
TEKKVKLEEKSSSSFGKKKEKEKEKKEKKEKDHKSKQKKKKKKKKKSKQHDYSDYEDSSL
EFLERCSSPLTRSSGSSLTLRSMFTEKNTSYQYPRAILSVDLSGENLSDVEFLDDSSTES
LLLSGDEYNQDFDSTNFEESQDEEDALNEIVRCICEMDEENGFMIQCEECLCWQHSVCMG
LLEDSIPEQYICYICRDPPGQRWSAKYLYDKDWLNNGHMCGLSFLKENYSHLNAKKIVST
HHLLADVYGVTEILHGLQLKIGILKNTHHPDLHLWACSGVRKEQEQVTFGVEKKIVTLPD
TVNPSERTCHNQSHKEPPPSLPQKMEETYVTSEHSYQKPQSFGQDCKSVTDPVSSDDEDM
SSFEEDQEFCSDDKNCSQYSLKEDGMSEQKNTAEGNVVCACNEKKGSEEQVDSHLQWQLN
LLTHIENVQNEVTSRMDLIEKEVDVLESWLDFTGELEPPDPLARLPQLKRRIKQLLIDMG
KVQQIATLCSV
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagcctccaagtcgtccagggatcacgttcgagattggtgctcgtttggaa
gcactggactacttacagaaatggtatccatctcgcattgagaaaatagactatgaagag
gggaagatgttggtccattttgaacgttggagtcatcgctatgatgagtggatttattgg
gacagcaatagattacgacccctggaaagaccagcactaaggaaagaagggctaaaagat
gatgatgaatttattgattttaaacctggagaagaggtgctagctcgttggacagactgt
cgatattatcctgctaagattgaagcaattaacaaggagggaaccttcacagtacagttc
tatgatggagttattcgatgcctaaaaaggatgcatatcaaatctatgcctgaggatgcc
aaagggcaggcgcgcgagagggagcagatagcgccggagctgagattagtgacggaaatc
gaaccaaaagaagattggatagctttggtcaaagctgctgctgcagcagcagccaagaac
aaagcaggaagtaaacctcggaccagtgcaaacagcaataaagataaagaggagagaaaa
tggtttaaagtaccttcaaagaaggaagaaacctcaacctctacaatcatacaggaagtc
cagaaaaaggaagaggagcctacatctagtgaaacgttcgtaggattcccagtagtggac
attcctaagatggcgtttgtgcgggcagagagcacattatcgcacaagaggaaaagtaat
ctaggcaactcatttcaggcaaagagagctcgtcttaacaagatcactggtttgttggca
tccaaagctgttgttgtggatggtgctgaaaaaaaggaaggcaacaaagaaacagctcca
gtcctggagcaggagatttcacctaaacctcaaagtcagaaaaaaaatgaagctgatatt
agcagttctaccaacactcagaaacctgcactgttatcctcaactttgtcttcaggaaag
gctcgcagcaagaaatgcaaacaagaatctggagattcttctgggtgtataaagccccct
aaatcaccactttccccagagttaatacaagtcgaggatttgacgctggtctctcagctt
ccttcttctgtgataaataaaactaatctctttttaggtccgtcacagccagtgaatccc
cctagatcctacaaatatagccagaggagaagaagatcacagcgtttagccacttgctcg
ttgcctgatgagtctatacaaaaagttccttctccctctccagtcactgatggaaaagtg
ttctccatcagtgctcaaaatcaacagccatcaatatcagaggtacctgatgttgctcat
atgtcacttgagaagcgtggaccatgtctccctcttgacttaagccgtagtttggaagtt
acagcgccattatccacagaatccactttccgtaatgagtaccccagtaaagaaaaggaa
gatactcagatgattacatatcattcttccaaagcagtaactgatggaagagtagctaca
acagcgtcagcaccctcgtcccatgtacatgccttacatctggaaatgcctttaaccaat
agtctaaagttacccaaagggaatagtaaaaaaaagaggtcttccacgtcagtcagctct
gaagggacagagatacagttctctgtgcctgtaaaggagaaatgttttgagaatctgcag
gagaaaatgttaaagaaggtcattgagaaggacaagcattcagaagttggtatattgaaa
actgaaaaaaaagtgaaattggaagagaaaagctcatcatcatttggtaaaaagaaggag
aaagagaaagagaaaaaagagaaaaaggaaaaagatcataaatcaaaacagaagaagaag
aagaaaaagaagaagaaatctaaacagcatgattattcggattatgaagatagttctctt
gagtttttggaaaggtgttcctctccactcacacgttcttctgggagctctctgactctg
cgaagcatgtttacagagaagaacacttcataccagtatccaagagccattctgtctgtc
gacctgagtggagaaaacctctcggatgtggagttcttagatgattcctccacggaaagc
ttattactgagtggtgatgaatacaatcaggactttgattcaaccaattttgaagaatct
caggatgaagaggatgctctcaatgaaattgttagatgcatctgtgaaatggatgaggaa
aatggcttcatgattcagtgtgaagaatgcctgtgctggcaacatagtgtatgtatggga
ttattagaggacagcattccagagcagtacatctgttacatctgcagggacccaccaggt
cagagatggagtgccaaatatctttacgataaggactggttaaacaatgggcatatgtgt
ggattatcatttttaaaagaaaactactcgcaccttaatgccaaaaagatagtgtcaaca
caccacttgctggctgatgtgtatggcgtaactgaaattctacatggactgcagctgaag
attgggatactaaaaaatacacatcatcctgatcttcatctttgggcttgctcaggggtg
cgaaaagagcaagagcaagtgacatttggggtagaaaagaaaatagtgactttgccagat
actgttaatccatctgaaaggacatgtcacaatcaaagccataaagaaccaccccctagt
ttaccgcagaagatggaagaaacgtatgttacaagcgagcacagttaccagaaaccacag
agttttggtcaggactgcaaatcagttactgaccccgtgagctcagatgatgaagatatg
agtagttttgaggaagatcaggaattttgttcagatgataaaaactgttcacaatattct
ttaaaagaagatggcatgagtgagcagaagaacactgctgaagggaatgtggtgtgtgcc
tgtaatgaaaaaaaaggatcagaagaacaagtggattcacatcttcaatggcagctaaat
ctcctgacccacatagagaatgtacagaatgaagtcaccagcagaatggatcttattgaa
aaggaagttgatgttttagaaagctggcttgacttcactggagagctggaacctccagat
cctcttgcaagactgcctcaactcaagcgacgtatcaaacagctcttaattgacatgggg
aaagtacaacaaatagccacgctgtgctctgtatga
DBGET
integrated database retrieval system
