Trachemys scripta elegans (red-eared slider): 117873829
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Entry
117873829 CDS
T07347
Symbol
TNPO3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
tst03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117873829 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117873829 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117873829 (TNPO3)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
117873829 (TNPO3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
117873829
NCBI-ProteinID:
XP_034619550
LinkDB
All DBs
Position
1:3652890..3699078
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AA seq
881 aa
AA seq
DB search
MKMKIQTSFYELPTDSHASLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQMASWKGCV
QTLVEKYSNDVTSLPFLLEILTVLPEEVNSRSLRIGANRRTEIIEDLAYYSSTVISLLMT
CVEKAGNDEKMLMKIFRCLGSWFNLGVLDSNFMANSKLLSLLFEVLRQDKTSSNLHEAAS
DCVCSALYAIENVETNLPLALQLFQGVLTLEAAYHMAVAREDLDKVLNYCRVFTELCETF
LDKIVCTPGHGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTDDAVIHSIFK
AYIQRLLHALARHCQLDPDHEGVPEETDDFGEFRMRVSDLVKDLIFLVGSVECFAQLYAT
LKDGNPPWEVTEAVLFIMASIAKSVDQDRACFTQPYASQPRTQHRRARGTKENNPTLVEV
LEGVVRLPESVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKSLASAAAKA
IHNICSVCRDHMAQHFNGLLEIARSLDSFMLSPEAAVGLLKGTALVLARLPLEKIAECLS
ELCAVQVMALKKLLSQEPSNGLSSDPTVPLDRLAVIFRHTNPIVENGQTHPCQKVIQEIW
PVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYQAHQHSCFLY
LGSILVDEYGMEEGCRQGLLDMLQALCLPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQR
SPITLLRSQVIIPILQWAIASTTLDHRDANCSVMKFLRDLVHTGVANDHEEDFELRKELI
GQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQIDRPTFCRWLENSLKGLPKE
TTGGAIQVTHKQLTDFHKEVTSAEECKQVCWALRDFTRLFR
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagattcaaacctcgttctatgaactccccacagattcgcatgcttcgttg
cgggactctttactgtcccacattcagaacttgaaagacctgtcacccgtcattgtaact
cagcttgcattagcaatagcagatctcgccctacaaatggcttcttggaagggctgtgta
cagacactggtggaaaagtacagtaacgacgtgacatcactgccctttctgctggagatc
ctcacggtgctgccagaggaggttaatagccgatctttgcgcattggcgccaaccgccgg
accgaaatcattgaagacctggcttattactccagtacagtgatctcccttctaatgacc
tgtgtggagaaagcaggtaacgatgagaagatgctgatgaaaattttccgctgcctgggg
agctggttcaacctgggagttctggatagtaacttcatggccaacagcaagttactgtcc
ctcctcttcgaggtgctgcgacaagacaagacgtcctcaaacctgcacgaggccgcctct
gactgcgtgtgctcggcgctctacgccattgaaaacgtggagaccaacctgcccctcgcg
ctgcagcttttccagggagtcctgacgctggaggccgcctatcacatggctgtggcccgg
gaggatttagacaaggttctcaattactgccgcgtcttcactgaactctgcgagacgttt
ctggataaaattgtttgtacgccaggccatgggctgggggacctgcgcacgctggagttg
ttgctgatctgtgcaggccatccacagtatgaggtggtagaaatttcctttaacttctgg
tacagactgggggagcatctgtacaaaacggacgatgcagtcatacacagcatcttcaaa
gcctacatccagaggctcctgcatgctctggccagacactgtcagcttgacccagaccac
gagggtgtcccggaggagacagacgacttcggggagttccggatgagggtctcggacctg
gtgaaggacttgatcttcctggttggatcggtggaatgttttgcccagctttatgctacc
ttgaaggacgggaaccctccctgggaggtgacggaagctgttctcttcatcatggcctct
atagccaagagcgttgaccaggacagagcctgcttcacccagccctacgcctcccagccc
aggacacagcaccggcgagcgagagggacaaaggagaacaacccgacgctggtggaggtg
ctggagggggtggtgcgcctccccgaatccgtgcacactgctgtccgctacactagcata
gagctggtgggagaaatgagcgaagtcgtggacagaaaccctcagttcctggatcctgtg
ctgggttatttgatgaaaggtctctgtgagaagtcactggcctcggctgccgccaaagct
attcacaatatctgctcagtatgccgggaccacatggctcagcactttaatggcctgcta
gagatcgcccgctcccttgactccttcatgctgtctccagaggctgctgtgggactcctt
aaagggacagcgttggttcttgcccggctacccttggaaaagatagcagagtgcctcagc
gagttgtgtgccgttcaggtgatggcgctgaaaaagctgctgtctcaggagccaagcaat
ggcctgtcttcagaccccactgtgcccctagatcgactggctgtcatatttaggcatacc
aaccccattgtagaaaatggccagacccatccgtgccaaaaagtcatacaggaaatctgg
ccggtcctgtcggagaccctgaacaaacatcgtgccgataaccgcattgtggaacgctgc
tgccggtgcctgcgctttgctgtccgctgtgttggcaaagggtctgcggccctgctgcag
ccgctggtcacacagatggtgaacgtgtaccaggcgcaccagcactcctgcttcctgtac
ctcggcagcatcctggtggacgagtacgggatggaggagggctgccggcaggggctgcta
gacatgctgcaggcgctgtgcttgcctaccttccagctcctggagcaacagaatggcctt
cagaaccaccccgacaccgtcgacgacctcttccggctagccaccaggttcatccagcgc
agcccaatcaccttgctccgcagtcaggtgatcattcccatcctgcagtgggccatcgcc
tccaccaccctggaccaccgggacgcaaactgcagcgtcatgaaattcctgcgcgacctc
gtccacaccggggtggccaatgaccacgaagaggactttgaattgcggaaggagctgatc
gggcaagtgatgaaccagctgggccagcagctcgtgagccagctgctgcacacctgctgc
ttctgcctgccgccctacaccttgcccgacgtcgccgaggtgctctgggagatcatgcag
atcgaccggccgacattttgtcgctggctagagaattcactgaagggtttaccaaaggaa
acaaccggaggagccatccaagtgacgcacaaacaacttacggactttcacaaggaggtg
actagtgctgaggaatgtaaacaagtgtgctgggccctgagggacttcacccggttgttt
cgatag
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