Trachemys scripta elegans (red-eared slider): 117873851
Help
Entry
117873851 CDS
T07347
Symbol
TSNARE1
Name
(RefSeq) t-SNARE domain-containing protein 1 isoform X1
KO
K13814
t-SNARE domain-containing protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117873851 (TSNARE1)
Membrane trafficking [BR:
tst04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
117873851 (TSNARE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
Myb_DNA-bind_5
SNARE
Myb_DNA-bind_4
Syntaxin
MADF_DNA_bdg
TetR_C_11
Phosphoesterase
Motif
Other DBs
NCBI-GeneID:
117873851
NCBI-ProteinID:
XP_034619594
LinkDB
All DBs
Position
2:complement(275521849..276130859)
Genome browser
AA seq
599 aa
AA seq
DB search
MSYGSIDGSGFGSRNPFGGPSRQGYQPLATQIDPNELQELFQETSANIFRINSNVTSLER
TLRSLGTSNDTQELRDGLHATQQETNKTVTTSTKAIKQLSEIVRGSSRQERLQLDRLNNQ
LSDAIQRYGAVQKKIAEKSKALLPSGQRSSKQQSPRTPFSDLADDEKIFNGGDGMWQNQS
QDQALLSEITEEDLEAIRLREEAIQQIESDMLDVNQIIKDLASMVYEQGDTIDSIEANIE
TASSNVESANEQLAKASQHQRSRFKMAAGPRKRKEKFSPVELEILVAEVTKNHARLYGSE
RVNLSQPEREKIWCSIARKINAVARSPRTTRDLRRRWDDMKRRTKEKLVEMSRSTGEPRP
DTVLVRILESPLLGQEETIKEAEARVEAEEEDGGGGDDVMHTDGPHITLELQSDEEEEVP
GCTWVPLRTIEMPMPAETDALEQRGALHTSVSSPSPPSSPQRQQRATYGRRSSQTARHPK
RKYNVSEFEKQLMDAHLQQSTLLSSWYQQQSSLMIQQNLILENLVEQNKRLADNVESLNR
TLEKLVDYQQPRRETVHFVQDCTSGTSARLPSRIASGESVGQSGIEVFSGMILKVEEEI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatggttccattgatgggagcggattcggaagccggaacccctttggaggccca
tcgagacaaggatatcagcccctagccacccagatcgatcccaacgaactccaggaattg
tttcaggaaacttcagccaacatcttccgaattaactccaatgtgacttccttggaaaga
acccttcgatctcttgggacatcgaatgatacgcaagagctgcgagatggactgcatgca
acccagcaagagaccaataaaaccgttactaccagcacgaaagctatcaagcagctgtct
gagattgtcagaggttcatctaggcaagagcgacttcagctggaccggttgaataaccag
ctgtctgatgccatccagcgatatggagctgtgcaaaagaaaatagcagagaagtccaaa
gctttgcttccttctgggcagagaagcagcaaacagcagagtcccaggacccccttctcc
gacctggctgatgatgagaagatttttaatggaggagatggcatgtggcagaaccagagt
caggatcaagccctgctctcggaaatcacagaagaggacctggaggccatccgtctgcgg
gaagaagccattcagcagattgagagtgacatgttggatgtaaaccagatcattaaagac
ctggcctccatggtttatgaacaaggcgacacaatagacagtattgaagccaacattgag
actgcatcttctaatgtagaatcagccaatgagcagttggctaaagccagtcagcaccaa
aggagcagatttaagatggctgctggcccccggaagaggaaggaaaagttttctcctgta
gaacttgagattttggtggcggaggtgaccaaaaaccacgctaggctctatgggagtgag
agagtcaacctgagccagccagagagggagaagatatggtgcagcattgccaggaagatc
aatgctgttgccaggtccccccggaccacccgggacctccggaggagatgggatgatatg
aagaggcgcaccaaggagaagctggtggagatgagtcgctcaacgggggagcccagacct
gatactgtgctggtgcggattttggaaagtcctttgcttgggcaggaggagactattaaa
gaggctgaggccagagtggaggcagaggaggaggatggtggtggtggtgatgatgttatg
cacactgatggccctcacataactctggagcttcagtcagatgaggaggaggaagtgcct
ggttgcacatgggtgcctttgaggactattgaaatgcctatgccagctgagacagatgcg
ttagagcaacggggggcactgcacacctcagtttcctctccctccccaccttcctcccca
cagaggcagcagcgggctacctatgggaggcggtcatcccagactgcccggcatcctaag
cggaagtacaacgtctcagagtttgagaagcagctgatggatgcccatctccagcaaagc
accctcttgtcctcctggtaccagcagcagagctccctcatgatccagcagaacctcatc
ttggagaacttagtagaacagaacaagaggctggcagacaacgtcgagtcactcaaccgg
acgctggagaagctggtcgactaccagcagccacgcagggagacagtacattttgtgcaa
gactgcacctctgggacttctgcccgtctgccctcccggatagccagtggcgagtctgtg
gggcagtcagggatcgaggtgttctcgggaatgatcttgaaagtcgaagaggagatctaa
DBGET
integrated database retrieval system
