Trachemys scripta elegans (red-eared slider): 117873913
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Entry
117873913 CDS
T07347
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117873913 (SCRIB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_13
LRR_LRWD1
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
117873913
NCBI-ProteinID:
XP_034619699
LinkDB
All DBs
Position
2:282249147..282462467
Genome browser
AA seq
1989 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPSDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEI
SGLVALTDLLLSQNLLECIPAGIGQLKQLSILKVDQNRLAEVTESIGDCENLSELILTEN
VLTALPKSLGKLTKLTNLNVDRNRLTALPSEIGGCASLNVLSLRDNRLALLPPELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKADDDEEAGAEKRGLQRRATPHPSEL
KVMKKVIEVRRNEIYSAKPDVDLDSPNSEVKRLSAMSNRSEDSHVSNSTVSANFREEEEE
EEEWGGGDRLNGQVPETQELENEAKPGAKEEQEVEAVTGQEEELEVEYNEPTVHFAEDTL
IRSEDEDEDEDRPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDRVPEEE
EELGGCNNNAEPEEQEEAWDKDDVKNGALSTQPSVKGVSFDQANNLLIEPARIEEEELTL
TILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVGLH
CAEHHVAVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPREPRGGLCFPERP
EGAPPTDRFSTCLMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGTLHVG
DRVISINGVDMTEARHDQAVALLTASSPTIALLVEREGAQQLSEGDSAVVQRVRTHSPPP
PPSHGESPPEETPLLQRNHLPKALEDQYPIEEICLVKAGGPLGLSIVGGSDHSSHPFGIH
EPGVFISKVIPHGLASRSGLRVGDRILEVNTIDLRHATHQEAVNTLLSSTQELSMLVRRD
PPPPGMQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLK
VGLRILEVNHQSLLGMTHTEAVQILRSVGDKLLVLVCDGFDPKAAAAIEMSPGIIANPFA
AGIGRKNSLESISSIDRDLTPEELEILQKEMEMVREATQWEREEMEKVERMRREREAATQ
LLEEEAENISNEPLRLDYRTLAALPSNNLPRVTRALVQCDRASSGMESDCAVLPRPVALD
SQNSDPDPIAGLSSTVTSPPQDPASPGKHTERAALVLLHMQEPVGCPLTQDQLPKPQEPD
QESMVDSQPILFSENPFVVANRRGKAAGKACLGGPPLGYGQGGVLKTNLYSKAPAGESGP
GSSRRDASYSPSSQQPPAALRPAHLSGRETRFASINFIPPQDDSKSTKPGVIQPLSRVRQ
NAALPSSEGRDSPNPFQQPESCSSVQNSLRPPSPPSPEDVPVSVKQAYKTFAAVPLSQAN
KETHGQTSTEKPKASPEMLSSGGLHSPEQRSFRERQKYFEIEVKQQQVEKPPKRVSLVGE
DDLKKMKEEEARKLQQKRALLLEEEEEEEDVGKQMPDMSMQSSVIIEGVEYKIKRLNGRS
IQSPATRISETDEHSSSQRNSLEEGFKPEPRPNSMSGLIPVYPGGGEAGAPVRTAKAERR
HQERLRMQSPEFLSTQEKELSPAERRALEAEKRAMWRAARSSTLEDSIKQYEQDLARKLY
QSRQRAPAPGARPAQVSSPGQSHVSRTPGSGSQSRMKSLEQDALKAQMVIAKSKEGKKRS
TLEQLAESPSPAPTPSPTLPEDCSPRNVTSPGRLSMSEKKFDYREFAAIPSSKPVYEIQS
PEAVGNLRYVDDTNSTVPQEQGGPAEEEELLVTHDSSTPTTSALEEMALYSSKRKLRHSR
RSLEAAVPT
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctgtggcgctgtaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggcggtgcccgaggagatctaccgctacagccgctccctggag
gagctgctgctggacgccaaccagctgcgggagctgcccaagcctttcttccggctcctg
aacctacgcaagctgggcctgagtgacaatgagattcagagacttccccccgaggtggcc
aacttcatgcagctggtggagctagacatctctcgcaatgacattccagaaatccctgaa
agcatcaaattctgcaaatccctggagattgctgacttcagtgggaatcccctatccagg
cttcctgagggcttcacccagctgcggagcctgggccacctggccctgaatgatgtatcc
ctgcagagcctccccagtgatatcgggaatttggcaaatctggtgactctggagctgcgt
gagaacctgctcaagtccctccccacttcgctctcattcctcgtcaagttagagcagttg
gatcttggtggcaatgacctggaagtgctgccagacactctgggagcactaccgaacctg
cgggagctctggctagaccgaaaccagctctcggccctgcctccggagctggggaatctt
cggcgcttggtctgtctggatgtgtctgagaacaagctggagcagctgcccaatgagatc
agcgggctggtggcactgacagacctactgctgtcgcagaacctgttggaatgcatacct
gctgggattggtcagctgaaacagctctccatcctaaaagtggatcaaaatcggctggct
gaggtgacagagtcgattggggactgtgagaatctctcggagctcatcctgacagagaat
gtgctgacagccttgccaaaatccctggggaagctgacaaagctgaccaatttgaatgtg
gaccggaaccggctgacagcacttccctctgagattgggggctgtgccagtctgaatgtg
ctgtccctgcgtgacaaccgcctggcgcttctgcctcctgaacttgccaacaccacggag
ctgcatgtgctggatgtggcagggaacaggctgcagaacttgccctttgccctgacaaat
ctcaacctgaaggccctgtggcttgcagagaaccagtcccagcccatgctgaaattccag
acagaagatgatgagaagacgggcgaaaaggttcttacctgttacctgctgccccagcag
ccatctcccagtctagagaatctcctgcagaacagcgtggatgaaagttggacagacacc
aacttgaaccgggtcagtgtgatccagtttttggacgagcccaaagctgatgatgatgag
gaggctggagctgagaagagaggcctgcaacgcagagcaactcctcaccctagtgagctg
aaggttatgaagaaagtgatcgaagttcggcgcaatgagatatattctgcgaagcccgat
gtggacctggattctccaaactcggaggtgaagaggctgagtgccatgtccaatcgcagc
gaggactcgcatgtctccaacagcactgtctctgccaacttcagggaggaagaggaggag
gaggaggagtggggagggggagacaggctgaatgggcaagtgcccgaaacacaggagctg
gagaatgaggcgaagcctggagctaaagaagagcaggaggtggaggcggtgactggtcaa
gaggaggagctggaagtggagtacaatgagcccacagtgcattttgccgaggacactctg
atccggagcgaggatgaggatgaggatgaagaccgtccgttcccagtggagaagcagcgg
ctgatccgcaaggacacaccgcactataagaaacactttaagatcaccaagctgcccaag
ccagaggcagtggtggcgctcctgcaggggctgaacagtgacagggtccctgaggaggag
gaggagctggggggctgcaataacaatgcagagcccgaggagcaggaggaggcctgggac
aaggatgatgtgaagaacggagccttgtccacacagccgtcagtcaagggggtgtcgttt
gatcaagccaataatctgctgattgagcctgctcgcattgaggaggaagagctgaccctg
actatcctgcggcagacaggggggctaggcatcagcattgcagggggcaaaggctccact
ccctacaagggtgatgacgagggcatctttatttcccgtgtgtcggaggagggccctgca
gcccgagcaggagtccgtgttggggacaagctcctggaggtgaacggagtgggcctgcac
tgtgcggagcaccacgtggcagtggaggcgctgcgtggctcaggcagctccgtctccatg
acggtgcttcgggagcggatggtggagcccgagaatgccatcacggttacaccgctgcgg
cccgaggatgattacagcccacgagagccacggggtggcctgtgctttccagaacggcct
gagggggcgccgcccacagacagattctccacctgcctcatgcgcaatgagaagggactg
ggcttcagcattgccgggggcaagggctccacgccctacagggcaggtgacacggggatc
tttatctcgcggatcgcagagggtggtgcagcccatcgggatgggacgttgcacgttgga
gaccgggtcatctcgatcaatggggtagacatgacagaagccaggcatgatcaggcagta
gcgctgcttaccgcatcctcccccaccatcgcgctgctggtagagagagagggtgcacag
cagctcagcgagggagactcagcagtggtgcagcgagtgcgcacgcactccccaccacca
cctcccagccatggggagagcccgcccgaggagacgcctctgctgcaaaggaaccatctg
cccaaagccctggaggaccagtaccccattgaggagatctgtctggtcaaagctgggggg
cccctggggctcagcattgttggaggcagtgaccattcgagccacccgtttgggattcat
gaaccaggtgtctttatctcaaaggtcattccccatgggctggcatcccgcagtggcctg
cgagtaggggacaggatcctggaggtcaatactattgacctgcgccatgctacccaccag
gaggctgtgaacaccctgctgtccagtacgcaggagctaagcatgttggtgagacgagat
cctccgccacctggcatgcaggaaatctgcattgagaaggctcctggagaaaagctgggc
atcagcattcgggggggagcgaaaggccacgctgggaacccctttgaccccaccgatgag
ggcatcttcatctccaaggtgagctcctctggggctgctgccagggacggccggctgaag
gtggggctgcggatcctggaggtgaatcaccagagcctgctgggaatgacgcacacagag
gcagtgcagatcctacgcagtgtgggggacaagctccttgtgcttgtgtgtgatggcttt
gaccccaaggccgcggctgccattgagatgtccccaggaatcattgccaacccctttgca
gctggcattggccgcaagaacagcctggagagcatctcctccattgaccgagacttgacc
ccagaggagctggagatcctacaaaaggagatggagatggtgagggaggcgactcagtgg
gagagagaagaaatggagaaagtggagaggatgcgtagggagcgggaggcagccacgcag
ctccttgaggaggaggcagagaatatcagcaatgagcctttgcgactggactatcggacc
ctggcagctttgcccagcaataacttaccaagagtcacccgtgctctcgttcagtgtgat
cgagccagctctggaatggagagtgactgcgctgtgctgcctcggccagtggctctggac
agccagaattcagaccctgacccaatcgcaggcctgagcagcactgtaactagcccaccc
caggacccggcatcacctggcaagcacacagaaagggcagccctggtcctgctgcacatg
caggagcctgtgggctgccccctgacccaggaccagctgccaaagcctcaggagccagat
caagagagtatggtcgactctcaaccaatcctcttcagtgagaacccctttgtggtggct
aatcgaagggggaaggcagcaggcaaggcctgtctggggggccctcccctcggctacggc
caggggggagttctgaagaccaacctttactccaaggctccagcaggcgagtctgggcct
gggagctccaggcgggatgcctcttactcaccgagcagccagcagccacctgcagccctt
cggcctgctcacctgtcaggcagggagactcgctttgcttccataaacttcatcccaccg
caagatgacagcaaatcaaccaagccgggcgtcattcagcctctctcccgggtgcgacaa
aatgctgccctgcctagttcggagggcagagacagccccaaccccttccagcaaccggag
tcatgctccagtgtccagaactctctgcgtcccccctcacctccctctcctgaggatgtc
ccagtcagtgtcaagcaggcatacaagacctttgcagcggttcccctgtcacaggcaaat
aaggagacacatggtcagacaagcaccgagaaacctaaagcttctcctgagatgctgtcg
tcagggggactgcacagcccagaacagcgatccttccgtgagaggcaaaagtactttgag
atcgaggtgaaacagcagcaggtggagaagccccccaagcgtgtctccctggtgggggag
gatgacctgaagaaaatgaaggaggaggaagctcgtaaactgcagcagaaacgggctctg
ctgttggaggaggaggaggaagaggaggatgtggggaagcagatgcctgacatgagcatg
cagtccagtgtcatcatcgaaggagtggagtacaagatcaagagactaaatggaaggagc
atccagtccccggcaactcggatctctgagacagatgagcacagcagctcccagagaaac
tcactagaagaaggattcaagcccgagccgaggcctaactctatgtctggactgatccca
gtttacccaggagggggtgaggcaggggcacctgtgcgaacggccaaagctgaacgacgg
catcaggagcgattgcggatgcagagccctgagttcctaagtacccaggagaaggagctg
tctccagctgagcgccgggccctggaggcagagaaacgagccatgtggagggcagcacga
tcctccactcttgaagacagtattaaacagtacgagcaggatctggccaggaagctctac
cagtcccgacagcgggcacctgcaccaggggccaggccagctcaggtgtctagcccaggg
cagagtcacgtctcaagaacccctgggtcaggaagtcaatccaggatgaagtctctggag
caggatgccctcaaagcccagatggtgattgccaagtccaaggaggggaagaagcgcagc
acactggaacagctggctgaatcgccttcacctgctcccaccccctccccaacccttcca
gaagattgcagccccaggaatgtcacttcaccagggaggctgtccatgtctgaaaagaag
tttgactaccgggaatttgctgctattccttcttccaaaccagtttacgaaattcagtca
cccgaagcagttggcaatctcagatacgtggatgacacaaatagcacagttccccaggag
cagggtgggcctgcagaggaagaggagctgttagtaactcacgattcctcaacacccacc
acatcagcacttgaagaaatggctctgtacagcagcaagcgcaaactccggcacagccgt
cgcagtctggaggctgctgtccccacatag
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integrated database retrieval system
