Trachemys scripta elegans (red-eared slider): 117873915
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Entry
117873915 CDS
T07347
Symbol
SMO
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117873915 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tst04030
]
117873915 (SMO)
G protein-coupled receptors [BR:
tst04030
]
Frizzled / Smoothened family
117873915 (SMO)
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Ortholog
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GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
117873915
NCBI-ProteinID:
XP_034619708
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All DBs
Position
1:4407877..4438421
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AA seq
854 aa
AA seq
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MAGSLQSGPRPRGPARPRGGEEGRGGLGMAPAGWARGPLLWGLLLQLSLGPGPPACRGAQ
LNASAARDRCKRAAPCERLRSNACLGSALPYAATSTLLAADSGSQEEAHDKLLLWSGLRN
APRCWDAIQPLLCAVYMPKCEDGQVELPSQTLCQATRGPCTIVERERGWPDFLKCTTDRF
PEGCPNEVQNLKFNSSGHCEAPLVQTDNPKSWYEDVEGCGIQCQNPLFTEHEHRDMHLYI
AAFSSVTIFCTFFTLATFVADWKNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARGEIV
CRADGTMRLGEPTSNETLSCVIIFVIVYYSLMSGVIWFVMLTYAWHTSFKALGTTYQPLL
GKTSYFHLVTWSIPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIV
GGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFACHFYDF
FNQAEWERSFREYVLCEANVTIAIQTNKPIPNCEIKNRPSLLVEKINLFAMFGTGISMST
WVWTKATVLIWKRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRKELLRNPEQEVSFSMRTV
SHDGPVAGLAFDINEPSADVSSAWAQHVTKMVARRGAILPQDISVTPVATPVPPDERANL
WVVDAEISPELEKRASRKKKRRKKKEVCPLEPAICDVGYFTPPARSAVPRLPKLPRQKCL
VSNPRESQLGEEVPPPGSYPGLRLSISQHEGLFPRDNPARSRKHDAFHLISHPFCPETGP
QEDLALEGSVRCFLAHQQHMGSFRPPAAGLDPGALPGGSIPCGPRTPGRRAGFAPIHSQT
NLMNAELLDADSDF
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggctgggagtttgcaaagtggcccgcggccccggggcccggctcgccctaggggaggc
gaggaggggcgcggggggctggggatggccccggcgggctgggcccggggccccctgctc
tgggggctgctgctgcagctgagtctgggcccggggccgcccgcctgccgcggggcgcag
ctcaacgcctcggccgcccgggaccgctgcaagcgagcggcgccctgcgagcgcctccgc
tccaacgcctgcctgggctcggcgctgccctacgccgccacctccacgctgctggccgcc
gactcgggctcccaggaggaggcgcacgacaagctgctgctctggtccggtttgcggaac
gcccctcgctgctgggatgcgatccagcccttgctctgcgccgtgtacatgcccaagtgc
gaggacggccaggtggagctgcccagccagaccttgtgccaggccacgcggggcccatgc
accatcgtggagcgggagcggggctggcccgacttcctcaagtgcaccacagaccgcttt
cccgagggctgcccgaacgaggtgcagaacctcaagttcaacagctcgggccactgcgag
gccccgctggtgcagacggacaaccccaagagctggtacgaggacgtggagggctgcggc
atccagtgccagaaccccctcttcacggagcacgagcaccgcgacatgcacctgtacatc
gccgccttcagctccgtcaccatcttctgcaccttcttcaccctggccacgtttgttgcc
gactggaagaactcgaaccgttacccggccgtcattctcttctacgtcaacgcctgcttc
ttcgtgggcagcatcggctggctggcgcagttcatggacggggcccgcggcgagatcgtg
tgccgagccgacggcaccatgcggctgggagagccgacctccaacgagacgctttcctgc
gtgattatcttcgtcatcgtctactactcgctgatgtcgggcgtgatctggttcgtcatg
ctgacctacgcctggcacacctctttcaaagcgctgggcaccacctaccagccgctgctg
ggcaagacctcctacttccacctggtcacctggtccatccccttcgtcctcactgtcgcc
atcctggccgtcgcccaggtggacggagactccgtcagcggcatctgctttgtgggctac
aagaactatcggtaccgcgctggcttcgtcctggctcccatcggcctggtgctgatcgtg
ggaggctatttcctgatccgaggtgtcatgactctgttctccatcaaaagcaaccacccc
ggcctgctgagcgagaaagctgccagcaaaatcaacgagaccatgttacggctgggcatc
ttcggcttcctggccttcggcttcgtcctcatcaccttcgcctgccacttctacgacttc
ttcaaccaggctgagtgggagcggagcttccgggagtacgtcctgtgcgaagcgaacgtg
acgatcgccatccagaccaacaagccgatcccaaactgcgagatcaagaaccggcccagc
ctgctggtggagaagatcaacctctttgccatgttcggcaccggcatttccatgagcacc
tgggtgtggaccaaagccaccgtcctcatctggaagcgcacatggtgcaggctgaccggc
cagagcgacgatgagcccaagaggatcaagaaaagcaagatgatcgccaaggccttctcc
aagcggaaggagctgctgcgcaacccggagcaggaggtgtccttcagcatgcgcaccgtc
tcgcacgacgggcctgtggctggtttggctttcgacatcaacgagccctcagctgacgta
tcctcggcctgggcccagcacgtcaccaagatggtggccaggagaggggccatcctgccg
caggacatctccgtcacgcctgtggcgacacccgtgccgccggacgagagggccaacctg
tgggtggtggatgcagagatctcgcccgagctggagaaaagagccagccgcaagaagaag
aggaggaagaagaaggaagtctgccccctggagcccgccatctgcgacgtgggctacttc
accccgccggcccgcagcgccgtccctcgcctgcccaagctgccaaggcagaagtgcctg
gtctccaaccccagggagtctcagcttggggaagaggtgccgccccctggctcctaccct
ggcctgaggctcagcatctcccagcacgaaggcctcttcccccgggacaaccctgccagg
tccaggaaacacgacgccttccatctgatcagccaccccttctgccccgagaccgggccc
caggaagatctagccctcgagggcagcgtgaggtgcttcctggcacaccagcagcacatg
ggctcgttccggccccccgccgcgggcctggatcccggcgccctgcccggcgggagcatc
ccctgcgggccgaggactcctggcagaagggcgggcttcgcccccatccactcccagaca
aacctcatgaacgccgagctgctggatgccgattccgacttttag
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