Trachemys scripta elegans (red-eared slider): 117873935
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Entry
117873935 CDS
T07347
Name
(RefSeq) uncharacterized protein LOC117873935
KO
K13916
cathelicidin antimicrobial peptide
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117873935
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Gene cluster
GFIT
Motif
Pfam:
Cathelicidins
Spp-24
Cystatin
Motif
Other DBs
NCBI-GeneID:
117873935
NCBI-ProteinID:
XP_034619730
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All DBs
Position
2:2951284..2965626
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AA seq
297 aa
AA seq
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MANCWAVLLLVVTAATAVPVKTPEPYEKAIARAIDFYNQGPTVKYAFRLLTSSPPPEVAQ
VAISNTLQLNFTIMETTCQVSDQVRVEQCAFKENGLVRDCSGHFSTQEVCPVVAITCDVA
PPQPVRVTRWWPLLRIGAKILAVQHHRTCLPEASSAVQHRLGHRYQISTLQGTALRLTTD
PRSLPAPTQSSSKHVLISSQAATNEALHLLEFTVKETECPVSENLLLDQCDFRDNGVVRK
CSGTVSTELQAPWVLLTCHPVAQEASFHSADVGRTWAGSESPCALPAAADTPHTLQD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactgctgggcggtcctgctgctggtggtcaccgcagccaccgcggtccccgtg
aagacccctgagccctacgagaaggccattgcccgagccatcgacttttacaaccaagga
ccaacagtgaaatacgccttccgccttcttacatccagccctccgcctgaagtggcccag
gtcgccatatcgaatactcttcagctgaacttcaccatcatggagaccacgtgccaagtg
tcagaccaagtccgtgtggagcaatgcgccttcaaagagaatgggctggtcagagactgc
tcaggacacttctccacccaggaagtatgccctgtcgtcgcgatcacctgtgatgtcgcc
cctccgcagcccgttcgcgtcaccaggtggtggccccttttgcgcataggcgcaaaaatc
ctcgctgtacagcatcaccgcacctgcttgcctgaggccagcagcgccgtccagcacagg
ctcggacaccgctaccaaatcagcacgctgcaggggacggctctccgcctcaccaccgat
cccaggagcctcccagcacccacgcagtctagttccaaacacgttttaatttcttctcag
gccgcgaccaatgaagccctccacctgctggagtttacagtgaaagagaccgagtgcccc
gtgtctgagaacctgctcctcgatcaatgcgacttcagggataacggggtggtgagaaag
tgctcaggaaccgtctccactgagctgcaggccccctgggttctgctcacctgccacccg
gtggctcaggaggcgagctttcattcggctgatgtggggcggacttgggctgggtcagag
agtccctgtgccctccctgctgctgctgacacgccccatacgttgcaggattga
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