Trachemys scripta elegans (red-eared slider): 117873945
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Entry
117873945 CDS
T07347
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117873945 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117873945 (SMARCD3)
03036 Chromosome and associated proteins [BR:
tst03036
]
117873945 (SMARCD3)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117873945 (SMARCD3)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117873945 (SMARCD3)
PBAF complex
117873945 (SMARCD3)
GBAF(ncBAF) complex
117873945 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
117873945
NCBI-ProteinID:
XP_034619740
LinkDB
All DBs
Position
2:9089556..9236995
Genome browser
AA seq
453 aa
AA seq
DB search
MATDEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYVGSPSVRPGM
PQTVMEPTRKRTAPQQVQQQQAQQQVQQQQQATQTRTRSAKRRKMADKILPQRIRELVPE
SQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKSDADDSDGS
IASWELRVEGKLLDDWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLA
RLLGIHTQTRSAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLT
NLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEITALDN
KIHETIESINQLKIQRDFMLSFSKDPKGYIQDLLRSQSRDLKVMTDVVGNPEEERRAEFY
HEPWSQEAVSRYFYCKIQQRRQELEQSLGVRNT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatgaagttacaggaggggctcgcaaagctacgaaaagcaaactttttgag
tttctggtccatggggtgcgccctgggatgccatcaggtgctcgaatgccccatcagggg
gctccaatgggtcccccaggctcaccatatgttggaagcccctcagtgcgccctggaatg
ccccaaacagtgatggaaccaacacgaaaacgcacagcacctcagcaggtacaacaacag
caggcgcaacagcaggtgcaacagcagcagcaagcaactcaaacccgaacccggagtgcc
aagaggaggaagatggctgacaaaattctccctcagaggatccgggagttggttcctgag
tcccaggcctacatggacctgttagcctttgaacgcaaactggaccagaccattatgagg
aagcgggtggacattcaggaagccctgaagagaccgatgaagcaaaaacggaaactgagg
ctttacatctccaacacctttaaccctgcaaaatctgatgctgatgactctgatggcagc
attgcatcctgggagctgcgagtggaagggaagctcctggatgattggcatagaactccc
actacccaggagactgatggcttccaggtgaagaggcctggtgatgtgagtgtgaggtgc
acacttctcctcatgttggattaccagcctccacagtttaaactggacccacgactggcc
cgtttgttgggaatacacacacagacccgatcagcaattatccaggccctctggcagtac
atcaaaacaaacaaactgcaagactcccatgataaggaatacatcaactgtgacaaatac
ttccagcagatcttcgactgtccacggctaaaattttccgaaattcctcagagactcact
aatctgctgctgcctccagaccccatagttataaaccacatcatcagtgttgaccccaat
gaccagaaaaagacagcgtgttatgacatcgatgtggaagttgaagatcctttaaaagga
caaatgagtagctttctcctctcaacagccaatcagcaggagatcacagcactggacaac
aagattcatgagacaatcgaatctataaaccagctaaagatacaacgtgatttcatgctg
agtttctccaaagatcccaaaggatacattcaagaccttctccgatcccagagcagggat
ctcaaggtgatgactgatgtggttgggaaccctgaggaggagcgtagagctgaattttat
catgagccctggtcccaggaggctgtgagcagatatttctactgcaagatccaacagcgc
cggcaggaactggaacagtctctgggagtgcgtaacacataa
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